Prionailurus viverrinus (fishing cat): 125157180
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Entry
125157180 CDS
T09889
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125157180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125157180
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125157180
Spliceosome [BR:
pviv03041
]
Complex A
U2 snRNP components
U2 related factors
125157180
Complex B
125157180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125157180
NCBI-ProteinID:
XP_047699509
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All DBs
Position
X:complement(53973008..53976276)
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AA seq
1039 aa
AA seq
DB search
MGRESCHYRKWSASRGRSXSSRSRSRSRSSRSRSRSPDRRSKRGDDRRSRSRDRDRRRER
SRSRDKRKSRSRDWKRLRHSRSRERDRSRERRRSRSRDRRCSRSRSRGRRSRSSSPGNKR
KKAETRSRSKEKTDSGESSKEKKKDXDDKEDEKEKDAGNFNQNKLXEEMRKRKERVEKWR
EEQRKKAMENIGELKKEIEEMKQGKKWSLEDGDDDEDDPAEAEKEGNEMEGEELDPLDAY
MEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKFVTVVTTKKAVVDSDKKKGELMENDQDA
MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVN
VFRLEMEGITVKGKGYPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQAIPAIMSGRD
LIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEREGPIAVIMTPTRELALQITKERKKFSKT
LGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLGRVTYVVLDLA
DRMFDMGFEPQVMRIVDNVHPDQQTVMFXATFPRAMEALARRILSKPIEVQVGGRSVVYS
DVEQVIVIEEEKKFLKLLELLGHYQELGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGG
IDQYDRDSIINDFKNGTCKLLIATSVAARGLDVKHLLLVNYSCPNHYEDYVHRAGRTGRA
GNKGYAYTFITEDQAHYAGDIIKALELSGTAVSSDLEKLWSDFKDQQKSEGKIIKKSSGF
SGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAINIDEQIESMFNSKKRVKDMAAP
GASSVPAPTVGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVS
AKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEISDFPQTARWKVTSK
EALQRISEYYEAAITIRGTYFPPGKEPKEGEWKIYLEIESANELAVQKAKAEITRLIKEE
LIRLQSSYQPTNKGRYKVL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggaatcatgccattatcggaagtggtcagcatcaagggggcgctcttgatct
agtcgatctagatctagatctagatctagtcgatctagaagtcgctcacctgacagaaga
agtaaacgtggagatgacaggcggtccagaagcagagatagagatagaaggagagagagg
tctcgtagcagggataaaagaaaatctcggtcaagagactggaagcgcctgaggcattcc
agaagtagagagagagatcgaagtcgagagcgaagaagatctcgaagtcgagacaggaga
tgctccaggagtagaagccgaggccggcgatccagatcctcaagtcctggcaataaaagg
aagaaagctgagactaggtctaggtccaaagagaaaacagatagtggggaaagttctaaa
gagaagaaaaaagacnnagatgacaaggaggatgaaaaagaaaaagatgctggtaacttt
aatcagaataagctgngagaagaaatgaggaagcgaaaagaacgagtagaaaaatggcga
gaggagcaacgtaaaaaggccatggaaaacattggggaactgaaaaaggaaatagaagag
atgaaacaagggaaaaaatggagtttagaagatggtgatgatgatgaagatgatcctgca
gaagctgaaaaggaaggaaatgaaatggagggtgaggagttagatccattagatgcttac
atggaagaagtgaaagaggaagtaaaaaagtttaatatgcgaagtgtgaagggtggtgga
gggaatgaaaagaagtctgggccaacagtcacaaaatttgtcactgtagtgacaaccaaa
aaagcagtggtagattctgataagaagaaaggtgagctaatggagaatgaccaggatgcc
atggagtattcttcagaggaggaagaagttgatcttcagacggcccttacaggctaccag
acaaaacagagaaagcttctagaaccagtggatcatggaaaaattgaatatgaaccattc
agaaaaaacttttatgttgaagttccagaattagcaaaaatgtctcaagaggaggtaaat
gtttttcggttggaaatggaaggcattactgtcaagggaaaaggttaccccaaaccaatt
aaatcttgggtccagtgtggaatttccatgaagatcctaaattctctcaaaaagcatggc
tatgaaaaacccacgccaatccagtcccaggcgattcctgctataatgtctggacgagat
ttgattggtattgccaagacaggaagcggaaagaccattgcttttctgttgcccatgttt
agacacatcatggatcagaggtcattagaagaaagagaggggccaatagctgtcatcatg
actccaactcgagaactggctttacaaattactaaagaacgtaagaagttttcaaagacc
ctgggacttagagtggtctgtgtttatggaggaacaggaatcagtgagcagattgctgag
ctgaaaagaggtgctgaaattattgtttgcacacctggtcgaatgattgacatgttagca
gctaatagtggtcgggtcacaaatcttggaagagtaacatatgttgttttagacctagca
gacagaatgtttgacatgggttttgaaccacaggtcatgcgcattgtggataatgtccat
cctgatcaacagacagttatgttttgagctactttccccagagctatggaggctttggct
cgcagaatcctcagtaaacccattgaagtgcaggttggaggcagaagcgtggtttactca
gatgtggaacaagtgattgtgattgaagaagaaaagaagttcttgaagttacttgagctt
ctcggccattatcaagagttgggatctgtcattatatttgtggataagcaggaacatgca
gatggtcttctgaaagatttaatgagagcatcttatccttgcatgtctcttcatggaggc
attgatcaatatgacagagatagcatcataaatgacttcaagaatgggacctgcaaactt
ctcatagccacttctgttgctgcccgaggtttagatgtgaaacatctgcttcttgtaaat
tacagctgccccaaccattatgaggattatgtgcacagagcaggacggactggaagagca
ggcaataaaggttatgcatatacttttatcacagaagatcaagctcactatgctggtgac
ataattaaagctcttgaattgtcaggaactgcggtgtcttctgatctggagaaactttgg
agtgatttcaaagatcagcagaaatctgaagggaaaataattaaaaagagtagtgggttc
tctggtaagggattcaaatttgatgaaacagaacaagctttggctaatgagaggaagaag
ttgcaaaaagcagctctcggtttgcaagattcagatgatgaggatgctgcaatcaacatt
gatgaacaaattgaaagtatgtttaattcaaagaagagagtaaaagatatggctgctcct
ggagcatctagtgttcctgctccaactgtgggaaatgctgagaaattagaaatagctaag
agactggctcttagaatcaatgctcagaagaatttgggtattgagtctcaggtagatgtg
atgcaacaggccaccaatgcaattctcagaggcggcaccatcctggctcccactgtgtct
gcaaaaaccattgcagagcaacttgctgaaaagatcaatgctaagctcaattatgtgcct
ttggagaaacaagaagaggagaggcaagatggtggacagaatgaatcttttaaaagatat
gaagaagaattagagatcagtgacttcccacagactgctaggtggaaagttacctctaag
gaagctctgcagagaatcagtgaatattatgaagctgcaattacaatcagaggaacatat
ttcccacctggcaaagaacctaaggaaggagagtggaaaatttacttggaaattgaaagt
gccaatgaactggctgtgcagaaagcaaaggcagaaatcaccagacttataaaagaagaa
ctgatccggctgcaaagttcataccaaccaacaaataaaggaagatacaaagtcttataa
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