Prionailurus viverrinus (fishing cat): 125167822
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Entry
125167822 CDS
T09889
Symbol
BLM
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03440
Homologous recombination
pviv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125167822 (BLM)
03460 Fanconi anemia pathway
125167822 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pviv03032
]
125167822 (BLM)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125167822 (BLM)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125167822 (BLM)
DNA replication proteins [BR:
pviv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125167822 (BLM)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125167822 (BLM)
Bloom's syndrome complex (BTR)
125167822 (BLM)
FA (Fanconi anemia) pathway
125167822 (BLM)
BRITE hierarchy
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
125167822
NCBI-ProteinID:
XP_047718521
LinkDB
All DBs
Position
B3:649159..739638
Genome browser
AA seq
1430 aa
AA seq
DB search
MIMAAIPQNNLQEQLERHSARKLNNGLSLAKPKSSGFTFKKKISSANDVSVTSVSVAKAP
VLSDKSVNVTETLSFSEPSPRITSQQTRVNDFKNAPAGQQTRRAVSKPSLPDLLQVPRGV
FCNTRNTSVVKKSSNATFKKLEFSSSSDSFVTVDDWDDMDDFDISGNSEAFVTPCKSHVV
RVSTAQKSKKSKRNFFQAQRSQANTIKADVTPSSSASEQARVTKEQNNSSEWLSDDVICI
DDDPIPEELLGGDAQDGHPVKTHLGKERESSEKKISEETELHPVEKSPCVELNKEDYDAD
FIPPSPEEVTSASSSALKCLSILKDLDASDTKDGPSTSEDLAKPKETTMWQPDQEISTDY
EARQTSLQQQLIRVMDHICKLVDTIPDDELTALDCGQELRQHRDIRRKLLADADSNTSGA
RVLGSVWRCWPEALGGPPEDMASLSSAEAFSNSDSCPTGSCVFVKELHFPHLPSNSNAAR
ECVLATTPGKTGFSASTKNPFERPLFSPHLQKSFVSSNWAETPRIEKRNESSYFPGNVLT
STAVKDQNKHTASLNDLEREIQASCDVDNFDIDDFDDDDDWENIMHNLAASKSSTAAYQP
IKEGRPVKPVSERISSAKTNCLPLASAAQIKNSESIQNYTDKSAQNLASRNLKREHFQSL
SFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSP
GVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTP
EKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVM
ALTATANPRVQKDILTQLKILQPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHP
HDSGIIYCLSRRECDTMAGTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATI
AFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILM
EKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKYPDVSCDNCC
KTKDCKTRDVTDDVKDIVRFVQEHSSAQGTQNKPPAGPSGRFTMNMLVDIFLGSKSAKIQ
SGIFGKGSTYSRHNAERLFKKLILDKILDEDLYINANDQPIAYMVPGNKAETVLNGHLKV
DFMETENSSSVKKQKALVAKMSQREEIVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLK
KLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPADDGSPRVSPGSSRGT
RRNAPVESDEEMPVSSHYFANETRNERKRKRMPASQRSKRRKTGFGGSKTKGGSTTCRRI
SAKSKSSNIFGPRSPLPGPQAAPGASRKLGIMAPPKPIYRPFLKPSYAFS
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggctgctattccccagaataatctacaggagcaactggaacgccactcagcc
agaaaacttaataacggattaagtcttgcaaaaccaaaatcttcaggtttcacttttaaa
aagaaaatatcttcagccaacgatgtatctgtcactagcgtatcagtagcaaaagcacct
gtgttaagtgataaaagcgttaatgttactgagaccctttcctttagtgaaccttcacct
cgtatcacaagtcagcagacaagggtcaatgactttaaaaatgctccagcaggacagcaa
accaggagagctgtttcaaaaccatcattgccagatttgctgcaggttccacggggagtt
ttttgtaatacccggaacacatcggttgtaaagaaatccagtaatgctactttcaagaaa
ttagaatttagttcttcatcagattcttttgttactgtcgatgattgggatgatatggat
gactttgatatttctggaaattcagaagcatttgttacaccgtgcaaaagtcacgttgta
agagtaagcactgctcagaaatcgaaaaagagcaagagaaacttttttcaagcacagcga
tctcaagcaaatacaataaaggctgatgtgactccgtcctcctctgcaagtgagcaagca
cgtgtgactaaggaacagaacaactcctcggaatggttaagtgacgacgtgatttgcatt
gacgatgaccctattcccgaagagcttctaggtggagatgctcaggatggtcaccctgta
aaaactcacttgggaaaagaaagagagagtagcgaaaagaagatctcggaagaaacggaa
ttacatccagttgagaagtctccgtgtgttgagctcaacaaagaggattacgatgcagat
ttcattcctccttctccagaagaagtcacctctgcctcttcttccgctttaaaatgtctc
agtatattaaaggaccttgacgcctctgacacaaaggatggtcctagcacatcagaggac
ttggcaaaacccaaggagacgacaatgtggcagcctgatcaagaaatcagcacagactat
gaggctagacagaccagtttacaacagcagcttattcgcgtgatggaccacatctgtaaa
ttagttgatactattcctgacgatgaactgacagctctggattgtggacaggaactgcgt
cagcatcgggacataagaaggaagctcctggccgacgccgactcaaatacaagcggcgcc
cgtgttcttggttcagtgtggaggtgctggcccgaggcgcttggtggccccccggaggac
atggcgtctctttcctctgcggaggcattttcaaacagtgattcctgtcctacaggaagt
tgtgtttttgttaaggagttacattttccacaccttccctcaaattccaacgctgctagg
gaatgtgtcctggccactaccccaggaaagacaggattctcagcctccacgaagaatccc
tttgaaagaccgttattcagtccccatttacagaagtcctttgtaagtagcaactgggct
gaaacaccaaggatagaaaaaagaaatgaaagctcttatttcccgggaaatgttctcaca
agcacggctgtgaaagatcagaataaacacactgcttcactaaatgacttagaaagagaa
atccaggcttcctgtgatgttgataattttgacatagatgactttgatgatgatgatgac
tgggaaaatataatgcataatttagcagccagcaaatcttccacagctgcctatcaacct
attaaggaaggtcggccagttaaaccagtatcagaaagaatttcttcagccaagacaaac
tgtcttccattggcatctgctgctcaaattaaaaactcagagtcaattcagaattacact
gacaagtcggcgcaaaatttagcatccagaaatctgaagcgtgagcatttccaaagtctt
agttttcctcatacaaaagaaatgatgaagatttttcataaaaaatttggcctgcataat
tttagaactaatcagctagaggcgatcaatgctgcgctgctgggtgaagactgttttatc
ttaatgcccactggaggtggtaaaagtttgtgttaccagctccctgcctgtgtttctcct
ggggtcaccattgtcatttctcccctgagatcacttatcgttgatcaggtccaaaagctg
acttccttggatattccagctacttatctgacaggtgataagactgactcggaagctaca
agtatttacctgcaattatcaaaaaaagatccaatcataaaactcctgtatgttactcct
gagaaggtgtgtgcgagtaatagactgatttccactctggagaacctgtatgagaggaag
ctcttggcacgtttcgtgattgatgaagcacactgtgtcagtcagtgggggcatgatttt
cgccaagattataaaagaatgaatatgcttcgccagaagtttccctctgttccagtgatg
gcccttactgccacagctaaccccagggtacagaaggacatcctcactcagctgaagatt
ctccagcctcaggtgtttagcatgagctttaacagacataatctgaaatactacgtgtta
ccgaaaaaacccaaaaaggtggcatttgattgcttagagtggatcagaaagcatcaccca
catgactctgggatcatctactgcctctccaggcgagaatgcgacacaatggctggcact
ttacagaaggatggtctcgctgctcttgcttatcacgccggcctcagcgattctgccagg
gatgaagtacagcacaagtggattaatcaggatggttgccaggttatctgtgcaacaata
gcattcggaatggggattgacaaacccgacgtgcgatttgtgatccacgcgtctctccct
aaatccgtggagggttactaccaggaatcgggcagagcggggagagatggggaaatatct
cactgcctgctgttctatacctatcatgatgtgaccagactgaagagactcatcttgatg
gagaaggatggaaaccgtcatacaagagagactcacttcaacaatttgtatagtatggtg
cactactgtgaaaatataacagaatgcaggagaatacagcttttggcttactttggtgaa
aatggatttaatcctgatttttgtaagaaatacccagatgtttcttgtgataattgctgt
aaaaccaaggattgtaagacaagagatgtgactgatgatgtaaaagatattgtaagattt
gttcaagaacatagttcagcacaaggaacacaaaacaaaccccctgcaggtccttctggg
agatttactatgaatatgctggtcgacattttcttggggagtaagagtgcaaaaattcag
tcggggatatttggaaagggatcaacttattcacgacacaatgccgaaagactttttaaa
aagttgatacttgacaagattttggatgaagacttatatatcaatgccaatgaccaacca
attgcctatatggtgccaggaaataaagccgaaactgtactaaatgggcatttaaaggta
gactttatggaaacagaaaactccagcagtgtgaagaagcagaaagctttggtggcaaag
atgtctcagagggaagaaatagttaagaaatgtcttggagaactgacggaagtctgcaaa
tctctgggaaaagtttttggcgtccattactttaatatttttaatactgtcactctcaag
aagcttgcagaatctttatcttccgatcctgaggttttgcttcaaattgatggcgttact
gaagacaaactggaaaaatacggcgcagaagtgattccaatattgcagaaatactcggag
tggacattgccagccgatgacggttccccccgggtgagtccgggcagcagcagaggcacc
agaagaaatgcccctgtggagtccgatgaggaaatgcccgtatcttctcactactttgca
aatgaaaccagaaatgaaagaaagaggaaaaggatgccagcctcccagaggtctaagagg
aggaagactggtttcggtggctccaagacaaaaggggggtccaccacgtgcagaaggata
tctgctaaaagtaaatcctccaacatatttggaccccgttcgcctttgcctggtccccaa
gcagcaccaggagccagtagaaaattggggattatggctccaccaaagcctatatataga
ccgtttcttaagccttcgtatgcattttcataa
DBGET
integrated database retrieval system
