Prionailurus viverrinus (fishing cat): 125168952
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Entry
125168952 CDS
T09889
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125168952 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125168952 (DDX46)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125168952 (DDX46)
Spliceosome [BR:
pviv03041
]
Complex A
U2 snRNP components
U2 related factors
125168952 (DDX46)
Complex B
125168952 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
125168952
NCBI-ProteinID:
XP_047720432
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All DBs
Position
A1:112044725..112114024
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AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR
SRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRSK
EKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKK
FNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGIT
VKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIE
EEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYT
FITEDQARYAGDIIKALELSGTAVPSDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFD
ETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAP
TAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccattatcggaagcggtcagcatcaagggggcgctctggaagt
cgatctagaagtcgctcacctgacaaaagaagtaaacgtggagatgacaggcggtctaga
agcagagatagagatagaaggagagagaggtctcgtagcagggataaaagaagatctcgg
tcaagagaccggaagcgcctgaggcgttccagaagtagagagagagatcgaagtcgagag
cgaagaagatctcgaagtcgagacaggagacgctccaggagtagaagccgaggccggcga
tccagatcctcaagtcctggcaataaaagcaagaaagctgagaataggtctaggtccaaa
gagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaggag
gatgaaaaagaaaaagatgctggtaactttgatcagaataagctggaagaagaaatgagg
aagcgaaaagaacgagtagaaaaatggcgagaggagcaacgtaaaaaggccatggaaaac
ataggggaactgaaaaaggaaattgaagaaatgaaacaagggaaaaaatggagtttagaa
gatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatggag
ggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaaaag
tttaatatgcgaagtgtgaagggtggtggagggaatgaaaagaagtctgggccaacagtc
acaaaagttgtcactgtagtgacaaccaaaaaagcagtggtagattctgataagaagaaa
ggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaagtt
gatcttcagacggcccttacaggctaccagacaaaacagagaaagcttctagaaccagtg
gatcatggaaaaattgaatatgaaccgttcagaaaaaacttttatgttgaagttccggaa
ttagcaaaaatgtctcaagaggaggtaaatgtttttcggttggaaatggaaggcattact
gtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttctatg
aagatcctaaattctctcaaaaagcatggctatgaaaaacccacgccaatccagacccag
gcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagcgga
aagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcattagaa
gaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaaatt
actaaagaatgtaagaagttttcaaagaccctgggacttagagtggtctgtgtttatgga
ggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtttgc
acacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatcttcga
agagtaacatatgttgttttagacgaagcagacagaatgtttgacatgggttttgaacca
caggtcatgcgcattgtggataatgtccgtcccgatcgacagacagttatgttttcagct
actttccccagagctatggaggctttggctcgcagaatcctcagtaaacccattgaagtg
caggttggaggcagaagcgtggtttgctcagatgtggaacaacaagtgattgtgattgaa
gaagaaaagaagttcttgaagttacttgagcttctcggccattatcaagaatcgggatct
gtcattatatttgtggataagcaggaacatgcagatggtcttctgaaagatttaatgaga
gcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagcatc
ataaatgacttcaagaatgggacctgcaaacttctcgtagccacttctgttgctgcccga
ggtttagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccattatgag
gattatgtgcacagagcaggaaggactggaagagcaggcaataaaggttatgcgtatact
tttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattgtca
ggaactgcggtgccttctgatctggagaaactttggagtgatttcaaagatcagcagaaa
gctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagtttgat
gaaacagaacaagctttggccaatgagaggaagaagttgcaaaaagcagctctcggtttg
caagattcagatgatgaggacgctgcagtcgatattgatgaacaaattgaaagtatgttt
aattcaaagaagagagtaaaagatatggctgctcctggaacatctagtgttcctgctcca
actgcgggaaatgctgagaaattagaaatagctaagagactggctcttagaatcaatgct
cagaagaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaatgcaatt
ctcagaggtggcaccatcctggctcccactgtgtctgcaaaaaccattgcagagcaactt
gctgaaaagatcaatgctaagctcaattatgtgcctttggagaaacaagaagaggagagg
caagatggtggacagaatgaatcttttaaaagatatgaagaagaattagagatcaatgac
ttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagtgaa
tattctgaagccgcaattacaatcagaggaacgtatttcccacctggcaaagaacctaag
gaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcaccagacttataaaagaagaactgatccggctgcaaaattcatac
caaccaacaaataaaggaagatacaaagtcttataa
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