Prionailurus viverrinus (fishing cat): 125172500
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Entry
125172500 CDS
T09889
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125172500 (SMARCAL1)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125172500 (SMARCAL1)
BRITE hierarchy
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125172500
NCBI-ProteinID:
XP_047726642
LinkDB
All DBs
Position
C1:complement(15712587..15766265)
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AA seq
952 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQHAGSGSSIATSSSQSKQGLPPNLPRE
PPKPVSHGVLFKQQNLSSSSTGDQRPANPHHFHLSTPQQAKGSGKIQEDVPTACLSHSPP
SQMTATRVSPPLAKSPPGAPTQQLLCHQSGQASHETKSTPVANTAREPLAKAKSFQKTPA
SSFGQPHRDPGLDAKAERPSTSGQNISDSRCGSGSVTARPEGRLPQKSGASFHKAVSSQQ
GTCIRSGDRFQVKIGYNAHLIAVFKSLPSRSYDPATKMWNFSMTDYSALMKAAQSLPSVT
LQPLEEAEDSRELPSAGGVVQACLPSAPSLAFVKGRCVLISRARFEADIGYSEHLTALFK
QMDSRNYDAKTRRWSFLLEEHNKLIAQVRCLPQVQLDPLPKTLTLAFASQLEKTSPCVPE
TIPEADLSGVDSKLVSSLLPFQRVGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFYRKE
WPLLVVVPSSVRFTWEQAFLRWLPSLSPDRINVVVTGKDRLTAGLVNIVSFDLLSKLEKQ
LKTPFKVVIIDESHFLKNIKTARCRAAMPILKVAKRVILLSGTPAMSRPAELYTQIIGVR
PTFFPQFHAFGLRYCDAKQQPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLAQLPAKQ
RKMVVIAPGRISTKARAALDAAAKEMTTKEKTNRQQKEALLLFFSRTAEAKIPCVIEYVL
DLLESGKEKFLVFAHHKVVLDALTKELERKHVQHVRIDGSTSSADRDDLCRQFQLFESHA
VAVLSITAASMGLTFSSADLVVFAELFWNPGVLLQAEDRVHRIGQSSSVSIHYLVAKGTA
DDYLWPMIQEKIKVLGEAGLSQTNFSEMAEATDYFHKVTPAHDSLPLGRGGGSGCALSCL
LSPWVLREKVWMPPGDFPQPRADRRPYSSSVAHLETSVSSPSHGTAQNQKGS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctctcacagaggagcagaggaaaaaaattgaagagaatcgacagaaggct
ctggcccgtagagctgagaaattattagcggaacagcatcagcacgcaggctccggctcc
tccattgccaccagctcttcccagtccaagcagggtctgccccccaatctccccagggag
cctcctaagccagtgagccatggtgtccttttcaaacaacagaatctcagcagttcatcc
actggtgaccaaagacctgctaatccccaccattttcatctaagcactccacagcaggca
aaggggagcgggaagatacaagaagatgtgcccacagcctgcctgagccacagcccaccg
agtcaaatgactgccaccagggtctctcctcccttggcaaaaagtcctccaggggccccc
actcaacagctgttgtgtcatcagtcaggtcaggcttcacacgagaccaaatccacaccc
gttgctaacacagctcgtgagcctttggccaaagcaaagagtttccagaagacaccggct
tcttcctttggacagccacacagggaccctggattagacgccaaggcagagaggccctcc
acctcggggcagaacatttctgacagccgctgtggttcagggagtgtgacagccaggcca
gaaggaaggctcccacagaaatcgggggcctcgttccacaaagcagtaagctcgcagcag
ggaacatgcataaggagtggggatcgtttccaggtgaagatcgggtataatgcacacctc
attgcagtctttaagagtctgcccagcagaagttacgatcctgccaccaagatgtggaac
ttcagcatgaccgactacagtgccctaatgaaagcagcccagagcctcccctccgtcacc
ctgcagcctttggaagaggccgaggacagcagggagttgccctctgctggtggtgtagtc
caggcctgcctgccttcagctccctcccttgcctttgtcaaagggcgatgtgtgctcatc
tcccgggcccgctttgaggcagacatcggctactctgaacatctgactgcactgtttaag
cagatggattccagaaattatgatgccaagaccaggaggtggagctttctcttggaagag
cacaataaattaattgcacaagtgcgctgccttccacaagttcagctggatcctctgccc
aagacgctcaccctggctttcgcttcacagctggagaagacgtctccatgtgtcccagaa
accatccctgaggcagacctttctggagtggactccaagctcgtgtccagtctgctgccc
ttccagagagtgggagtcaattttgccatagcgaaaagaggccgcctgctgcttgctgac
gacatgggcctggggaagaccattcaagccatctgtatcgcggccttttatcggaaggag
tggccgctcctggtggtggtgccgtcttcggtgcgcttcacgtgggagcaggccttcctt
cggtggctgccgtctctgagcccagaccgcatcaatgtcgtggtgaccggcaaggaccgc
ctgacagctggcttggtcaacattgtcagctttgaccttctgagcaagttagaaaaacag
ctaaaaaccccttttaaagttgtcatcatcgatgaatctcacttcctcaagaacattaag
acagcccgctgtcgcgcagctatgcccatcctcaaggttgccaagagggtgatcctgctg
tccggcacaccagccatgtcccggcccgcagagctctacacccagatcattggggtcagg
ccaactttcttccctcagtttcatgcatttggacttcgctactgtgatgccaagcagcag
ccctggggatgggattattcaggttcctccaacctcggagagctaaagctcttgttggaa
gaggcggtcatgctgcgacgcctcaagagtgatgtccttgcccagctcccagccaagcag
cgcaagatggtagtcattgccccaggccggatcagcaccaaggccagagctgccctggat
gccgcggccaaggaaatgaccaccaaggagaaaactaaccggcagcaaaaagaagccctc
ctcctcttcttcagtagaacagctgaagcgaaaatcccatgtgtcattgaatacgtcctg
gacctactggaaagtggaaaagagaagtttctagtgtttgcacaccataaggtggttctg
gatgcacttactaaagagcttgagagaaagcacgtgcagcacgtccgcatcgacggctcc
acctcctcagcagaccgggacgacctgtgccggcagttccagctgttcgagagtcacgcc
gtggccgtgctgtccatcactgccgccagcatgggcctcaccttctcctcggctgacctg
gtggtgtttgccgagctgttctggaatccaggggtgctgctccaagctgaggaccgggtg
caccgaatcggacagtccagctccgtgagcatccattacctcgtggcgaaaggcacagct
gacgactacctctggcccatgattcaagagaagattaaagttctgggtgaagccggactt
tctcagaccaatttttcagaaatggcagaagccactgattatttccacaaggtaacacca
gcacatgactccttgccactggggcggggtggggggtcggggtgtgcattaagttgtctg
cttagcccttgggtcctgagagagaaggtgtggatgcctcctggggacttcccccagcct
cgtgcagataggcggccttacagtagctcagtagctcatctggaaacctcggtgtcctct
ccttctcatggaactgcccagaatcagaaggggagttaa
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