Pseudescherichia vulneris: LMA04_07695
Help
Entry
LMA04_07695 CDS
T08658
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_07695 (sbcC)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMA04_07695 (sbcC)
Archaeal homologous recombinant proteins
LMA04_07695 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_tran
cobW
NTPase_1
ABC_ATPase
TsaE
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
WAH53906
LinkDB
All DBs
Position
1577149..1580286
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILTLRLKNINSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARSQAGGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKAARSELEQRQAQAEGIQLLSAAQAQTLNESLQVLTDQEQTLVATQQ
REQALLHWLTRGEELNADAARAQTALTTAQQALESARPQLAALEQARPAQQLRPVWQSLQ
EQIRTHGQTQRQAEEVNTRLQQLLGKRSRIRAAADAQMSALRQEQKTLADWLTAHEHWQR
WQSELTGWRANFAQQAEERKHALALNARREKLQQQLTLLNAPALDLSAEALQQAIADLAQ
QRPLRQRLNVLHASFAPLQQRIKQLQKTLAESDAEQTALNQTLTQRRQAYKEKNTLLTEV
KTICALEERIKGLEAERERLRAGEPCPLCGSTAHPAVAEYQAMTVDANQARRDALEREVK
QLAESGAALRGQLDALVKQSERDRLAAEAEAQNDMALRQQWRELCTALNITLTPEDDVSG
WLQAEENREQQLYRFSQRLALEEQLNELQQQAAHTQHAIDTRRQTLAASLAQLGLDLPVE
EEAAAWFAAREEESRRWQQSQTQAATLQERMAQIQPLLETLPADEPAEGAPVSLDGWQQV
HHDCVSLHGQAQTLQQQQALEAGRVAQQQAQFDAALAESPFPDQQAFLAALLEDGERQRL
EQLQQSLENQLQQSQALLTQAQTTLATHQAQPPAGLSEEASVEQTRAALNALAQQLRENT
TRQGEIRQQLRQDAESRQRQQALLQEIEEATRQLADWSYLNGLIGSKEGDKFRKFAQGLT
LDNLVWLANNQLTRLHGRYLLKRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER
IPVQIKVRKINGLGYSKLDGRFAVS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttaccctgcgcctgaagaacatcaactccctgaagggggagtggaagatt
gattttaccgccgagccgtttgccagcaacggcctgttcgctattaccggccccaccggc
gcgggaaaaactaccctgctggatgccatctgcctggcgctctaccacgagacgccgcgc
ctgagcaacgtgtcgcagtcgcagaacgacctgatgacccgcgacaccgccgagtgcctg
gcggaggttgagtttgaggttaaaggcgtagcctaccgcgccttctggagtcagaaccgc
gcccgcagccaggccggggggaatctccaggtgcctcgcgtcgagctggcgcgctgcgcc
gacggcaaaattctcgccgacaaggtgaaagacaagctggagctgaccgccaccctcacc
gggctggattacggtcgcttcacccgctcgatgctgctctcccaggggcagtttgccgcc
ttcctgaatgctaaaccgaaagagcgggccgagctgctggaggagctgaccggcaccgag
atctacggtcagatctcggcgatggtgtttgaaaagcataaggcggcgcgcagcgagctg
gaacagcgccaggcccaggccgaaggcattcagctgctgagcgccgcgcaggcccagacg
ctgaatgaaagtttgcaggtgcttactgaccaggagcagacgctggtcgctacccagcag
cgcgaacaggctctgctgcactggctaacgcgcggcgaggagctcaatgccgacgccgct
cgggcgcagaccgcgctgactaccgcccagcaggcgctggagagcgcccgcccgcagctg
gcggcgctggagcaggcccgccccgcccagcagctgcggccggtgtggcagagtttacag
gagcagatccgcacccacggccagacccagcgtcaggcagaagaagtgaatactcgctta
cagcagctgctaggcaagcgcagccgcattcgcgccgccgccgacgcgcagatgagtgcg
ctacggcaggagcaaaaaacgctggccgactggctaaccgcccacgagcactggcagcgg
tggcagagcgagctgaccggctggcgggccaactttgctcagcaggccgaggagagaaag
catgccctggcgctcaacgctcgccgggaaaagctgcagcagcagctgacacttctcaat
gcgccagcgctggatctgagcgccgaggcgttgcagcaggcaatagccgatcttgctcaa
cagcgcccgctgcgccagcgtctgaacgtgctgcatgccagctttgcccctcttcagcag
cgtatcaagcagctacaaaagacgttggccgagagcgacgcggagcagaccgcgctcaac
cagaccctgacccagcggcgtcaggcgtataaagagaagaatacgcttctgaccgaggtg
aagacgatttgcgccctcgaagagcgaattaaaggtcttgaggccgaacgtgaacgcctg
cgggccggcgagccctgcccgctctgcggatcgaccgcccatcctgcggtggcggagtat
caggcgatgaccgtcgatgccaaccaggcccggcgcgatgccctggagcgtgaggtcaag
cagctggcggagagcggcgcagccctgcgcggccagctggatgcgctggtgaagcagagc
gagagggatcgccttgccgccgaagccgaagcacaaaacgatatggcgctacgccagcag
tggcgcgagctgtgcaccgcgctcaatatcacgctgacgcccgaggatgacgtcagcggc
tggctacaggctgaggagaaccgcgagcagcagctctaccggttcagccagcggctggcg
ctggaggagcagctcaacgagctacagcagcaggcggcgcacacccagcacgccattgat
acccgccgccagaccctggcggcgagcctggcccagctcggcctggatctcccggtagaa
gaggaggcggcagcctggtttgccgcccgcgaggaggagtcccgccgctggcagcagagc
caaacccaggcagcgacgctccaggagcgcatggcccagatccagccgctgctggagacg
cttcctgccgatgaaccggctgagggagcgccggtcagccttgacggctggcagcaggtg
caccacgactgcgtctctctccacggccaggctcaaacgctccagcagcagcaggctctg
gaggccgggcgtgtggcgcagcagcaggcacagtttgacgccgcgctggccgaaagccct
ttccctgaccagcaggcatttctggccgctctgcttgaggatggcgaacgtcagcgtctt
gaacagctacagcagtcgctggagaaccagctacagcagagtcaggccctgttgacccag
gcccagacgacgctggcgacgcatcaggcccagccccctgccgggctgagcgaagaggcc
agcgttgagcagacgcgcgccgcgctaaacgcgctggcgcagcagctgcgcgagaacacg
acccgtcagggagagatccgccagcagctccggcaggacgccgagagccgtcagcgccag
caggcgctgctgcaggagatcgaggaggccacccgccagctggcggactggagctacctc
aacgggctgattggctccaaagagggggataagttccgcaaattcgcccaggggctgacg
ctggataacctcgtctggctggcaaacaatcagctcacccgtctgcacggccgctatctg
ctgaagcggaaagccagcgaagcgctggagctggaggtggtcgatacctggcaggcggac
gcggtacgcgatacgcgcacgctttccggcggggagagcttcctcgtcagcctggcgctg
gcgctggcgctctcggatctggtgagccataaaacccgtatcgattcgctattccttgac
gaggggtttggcacgctggacagtgaaacgctggataccgctctcgatgccctcgacgcg
ctcaacgccagcggcaagaccatcggcgtcatcagccacgtggaggcgatgaaggagcgc
atcccggtacagatcaaggtaagaaagatcaacgggttgggttacagcaagctcgatggc
aggtttgccgtgtcataa
DBGET
integrated database retrieval system
