Penaeus vannamei (Pacific white shrimp): 113819830
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Entry
113819830 CDS
T06111
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113819830
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113819830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
YfaZ
Motif
Other DBs
NCBI-GeneID:
113819830
NCBI-ProteinID:
XP_027227827
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MVIRRKIEHMVQTTMAAPFPYSQNGEAGAGVKADPSKEGPPFSPPGAPGAPAPGAPGAPP
APQTTPTAAVPGVPVTVSSSGATVAGGMAVQVPVGPPVVANGVEQQAVTANEAENGEAAA
NGQPGTPAPTKEQPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVT
FASASDADRARDSLNGTVVEGRKIEVNNATARVQTKKPTAAVPNVILARNGMVPTAVAAA
LRGVAIQRGRARTYPATALARHPTPLTAAATALHGYTPGVYYDPFLAAQAATATPLQVNP
QAAAAAAAAVGQPAAAVGAVNHPAVGASAAQLLKTPTLSVSTAQQAGYAAAANAYTAAAA
RAYGVAAAAAQPAAVAAYPTIAAGSIYYSAYADRPYPDPYIAAASGIGPVAGYGAVYRGS
YNRFAPY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcaggaggaaaatcgagcacatggtgcagacaactatggcagcgccgttccca
tacagtcagaacggcgaggcgggtgctggcgtaaaagccgacccgagtaaagaagggccg
ccgttctcgccgcctggtgcgccgggggcgccagcgccaggagcccccggagcgcccccg
gcccctcagaccacacccaccgctgccgtcccgggcgtacctgtcacagtctcatccagc
ggggcgacggtggcggggggaatggcagtacaggttcccgtcggtccccctgtcgtcgcc
aacggtgtcgagcagcaagcggttactgcgaatgaagcagaaaatggtgaagcagcagct
aatggtcaacctggcactccagcacccacaaaggaacagccaaagcgactccatgtctca
aatattccattcagatttagagacccagacctcagaaatatgttcggcaaatttggcaca
atccttgatgtggaaatcatctttaatgagcgaggatcaaagggctttggtttcgtgaca
tttgcttctgcatctgacgcagaccgtgccagagactcactaaatggcacagtcgtagaa
ggtcgcaagatagaggtgaacaatgccactgcccgtgttcagaccaagaagccaactgca
gctgttcccaatgttatactcgctagaaatggaatggtgccaactgccgtggcggcggcc
ctccgaggtgttgcgatccagcgtggcagggcccggacgtatccggccactgcccttgca
cgtcatcccaccccactaacagctgccgccacagctctgcatggctacacacccggtgta
tattatgaccccttcctagcagcgcaagcggcaactgcaactcctctccaggtgaatcca
caagcagctgcagccgcagctgcagcggtgggccagcctgctgctgccgttggtgcggtc
aaccaccccgccgtgggggcctccgccgcccagctccttaaaacaccaacactttctgtc
tcaacggcccaacaggcagggtatgcagcagcagcaaatgcctacacagctgccgcggca
cgggcttatggagtggctgcggcagccgcccaacctgcagccgtagcagcttaccctacc
attgccgctggatcgatctattacagtgcctatgctgacaggccctacccggacccatac
atcgcggctgcatccggaattggaccagtggcaggctacggagcggtctacagaggcagc
tacaatcgatttgcaccatactga
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