Penaeus vannamei (Pacific white shrimp): 113822344
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Entry
113822344 CDS
T06111
Name
(RefSeq) uncharacterized protein LOC113822344
KO
K06825
fibrillin 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04350
TGF-beta signaling pathway
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113822344
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113822344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113822344
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113822344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
EGF
HYR
Sushi
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
113822344
NCBI-ProteinID:
XP_027230678
LinkDB
All DBs
Position
Unknown
AA seq
1821 aa
AA seq
DB search
MPTTATPMTAPPRPGRRRQRGPGSRRGSRQRGRRPTSTTTEAPSVEQRQQDQHVITAYNV
VESPSTLKDHVKHSKVKGHTKQTRQEEENNEEVEEEATPTSPVSEVEREEEEEEMENGEN
TRERKKKNRRERKKDRKGRKGRRRKIEEEEDVDRSLNEVRRSGEGAEASERQPSPEDDLT
RVLEEKRERRRRRKERRNKKKKGGRNGDRQGKKRRKGRKGRRNEIPQAPQDVEDSLDLYG
ANFSPDVAGEADNQVPNEVVPRLDAEEGREGKRRRGGRRRRPGHRRGRPSTTTPPPVVTT
TPATTTTTTTPTTTTTTTTTTTTPATTVTTEVLYDSTGYPQDSSYSAVEPQYTIEGREVE
RTIVDFVPESPSGSSDEDALRKNAVEEELKYHEKDTRGNGRGRRKKKGKNKKNKKADKSH
GAVDKPEYEAEDVEDTYGEVPESEQGLEPREDEAPDVLEDLPEGYPTDRFMQRGSNSNYS
RFIETEDIQFDLLDMSCVVSESDSMYLPPPRVPNAHVTSYYTVTNPAPPNNVYAEAVYEC
KFGYRLTEGASNRVFCMEDKWLGVLPSCVAYARQKSSGKCEDENGDCEQICDPTPTGRQC
LCYKGFTLREDGASCQDVDECAVDNGGCEGKCINNLGSHRCHCPRGFRLGTNGKACIDKN
ECLLRNGHGPCQDTCVNTDGGYYCTCESMPGTHLGADNHTCEDVNECAVNNGGCSHICLN
TFGQIFCTCPEGFVMGMDWKTCEDIDECGYEEIASKCEHRCVNTPGSYHCAQAEELQQTA
LECPDGLAPTDDNLSCQDEDECAEGNFGCSDVCVNTHGGAHCACPAGYASRTTRPARAST
FSRSIRVLYVMSVTDERDDSEHEVKLPVTIPSQLKQCLDPVEPQVSHRAQVIFRSPTERG
VEASNRHTPDSSNFRGDCVGQPVDFDIHTTKVIHCNMKCHTTTLNVKCYRKTTARCGMGA
KGHQPLRVLQDHNVANEREVLDKCILAQKTAKYAYIKGREDRTPCETKRCLHEQTGELYS
LRECAKQQNKKKRATDTEATINGGCSHQCANHKGHYTCLCPEGYALAADNHTCVDVDECQ
LDNGSCSYKCVNKEGGYECHCPFGMALSGDMSTCKDEDECATDNGGCSHECHNTRGSYRC
ECPTGYRLASDGSSCEDIDECSVANGGCSHTCVNREGSFLCTCPRGYEISEDPYKCLDVN
ECAKAPCEHECFNTPGSYYCACRPGFKPKPDTSHQCWDVNECDEDNGGCAQDCFNSLGSY
HCGCSVEYLISEDGHSCDLKPVFCPVIVAPLHGEMVCSKDLVGGAYPMGTTCTFTCSEGA
ALHGNANTTCSQSGTWSNNPVTCQAVKCSALAEVEHGRVSPDRCTRRTSSVGQHCYLSCS
PGYRVVGNPVRTCQPAGTWSPDAVTPYCEKDTLRPFIQCPGDFSVDLAPHQSSSYVRLPQ
PKANVDWFRYVDASPSWAKQLEADLPAGKTTVTFIARSPLSEETAACSFVVEVIDKEEPQ
VFGCPKSFLVHLADGEASSEVTWKEPVFKDNVEIAHLWKSMEPGKKLTAGTYPVHYVAMD
PYRNRAKCSFTVTVQAAVVGLNKQCREPGQLVGGHWVCSELAWGRMCRPACQQGFVMIKK
SSSPIYICASSTGLWTPSSEFPACTPTVSFRPSTGCLPGFERRKTHPDVCLACTPGMHRS
SRQRQCTPCPLGTYTDNFASQRCKQCPDGSTTADPGPTRTPFVFSPLNGPRAPPVHRLNN
ERKYGKNAKRFRGRNPVRGDLASTYHEQAAASSSAAAHFLQSFPFSALPPGTTMALAHAH
VRGRSNSHAQAHAQAGIYSFG
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaaccgccacgcccatgacagcccctcctcgacccggccgcaggaggcagcga
ggacccggttcccgaaggggcagcaggcagcggggaaggaggcccaccagcaccacgacg
gaggcccctagcgtcgagcagcgccagcaagaccagcacgtgatcacggcctacaacgtg
gtcgagtcgccctccaccctcaaggaccacgtgaagcactcgaaggtcaaaggtcacacc
aaacagacgaggcaggaggaggaaaataatgaggaggtagaggaggaggcgacaccgacc
tcgcctgtgtcggaggtggagagagaggaggaagaggaagaaatggagaacggcgagaat
acaagagagaggaagaagaagaaccgaagagagagaaagaaggatagaaaaggtcgtaaa
ggaagaaggagaaagatagaggaggaggaggacgtggacaggtccttgaacgaggtgagg
aggagcggcgaaggagcggaggcgtcggagcgtcagccatctcccgaggacgacttgacg
agggtccttgaggagaagcgcgaaaggaggcgaaggaggaaggagagacggaataagaaa
aagaagggtggaaggaatggtgataggcaaggcaagaagcggaggaagggcaggaaaggc
cgaaggaacgagattcctcaggcgccgcaggacgtcgaggacagcctcgacctctacggc
gcgaacttctcccccgacgtcgccggcgaggcggacaaccaggtgcccaacgaggtggtg
ccgaggctggacgccgaggagggccgggagggcaagaggcggcgcggcggccggcggcgc
aggcccggccaccgccgagggcgcccctccaccacgaccccgccgccggtcgtaaccacg
acacccgcgaccactacaactaccacgacacccacgaccactacaactaccacgactaca
acaacgacgcccgccacgacggtcaccacggaggtcctctacgactcgaccggctacccg
caggactcctcctacagcgccgtcgagccgcagtacaccatcgaggggcgggaggtcgag
cggacgatcgtggacttcgtgcccgagtctccttcgggatcctccgacgaggacgccctc
cggaagaatgccgtcgaggaggagctcaaataccacgagaaagacacgcgagggaacgga
cgaggaaggaggaagaagaagggcaaaaacaagaagaacaagaaggccgataaaagtcat
ggcgcggttgataagccggagtatgaggcggaggacgtcgaggacacgtacggcgaggtc
cccgagtctgagcaaggactggagccccgggaggacgaggcgccggacgtcctggaggac
ctgcccgagggttacccgacggacaggttcatgcagaggggatccaactccaactactca
aggtttattgaaacggaagatatccagttcgacctcctggacatgtcgtgcgtggtctcg
gaaagcgactctatgtatctaccgccgccaagggttcccaacgctcatgtcacttcttat
tacaccgttaccaacccagcgccgcccaacaacgtctacgcggaggctgtgtatgagtgt
aaattcggctacagactgaccgagggagcgagcaacagggtgttctgcatggaagacaag
tggctgggtgtcctgccttcttgtgtcgcttatgcccgccagaagagcagcggcaagtgc
gaggacgagaacggcgactgcgagcagatctgcgacccgacccccacggggcgccagtgc
ctctgctacaagggcttcacgctgcgggaggacggcgcctcctgccaggacgtggacgag
tgcgcggtggacaacgggggctgcgaagggaagtgcatcaacaacctcggctcccatcgc
tgccactgcccgcggggattccgtctcggcaccaacggcaaggcgtgcatagataagaac
gagtgtctccttcgcaacggccacggtccctgccaggatacttgtgtcaacacggacgga
ggatactactgcacctgtgaaagcatgccaggcacgcacctgggagccgacaaccacacc
tgcgaggatgtgaacgagtgcgctgtcaacaacggcggctgctcgcacatctgcctcaac
accttcggccaaatcttctgcacttgtcccgaaggttttgtgatgggcatggactggaag
acgtgcgaggacatcgacgagtgtggctacgaggagatcgcgtccaagtgcgagcaccgc
tgcgtcaacaccccgggcagctaccactgcgcccaggcggaggagctgcagcagacggcc
ctcgagtgcccggacggcctcgcgcccaccgacgacaacctctcgtgccaagacgaggac
gagtgcgccgagggcaacttcggctgctccgacgtctgcgtcaacacccacggcggcgcc
cactgtgcctgccccgccggctacgcctcgcggacgacaagacctgcgagggcctccaca
ttttcccgctctatccgtgttctgtacgtcatgtccgtgacagatgagagagatgacagc
gagcacgaggttaaacttccagtcaccattccctcccaactcaagcagtgtctagaccca
gtagagcctcaggtgtcacaccgcgcgcaggtcattttccggtctcctacggaaagaggt
gtagaggcgagtaatcggcacacccctgactccagtaacttccgtggtgattgcgtgggg
cagcccgtcgacttcgacatccatacaacgaaagtcatccattgtaacatgaagtgtcat
acgacgacactgaacgttaagtgctaccgcaagacaacggcgcggtgtggcatgggcgca
aagggccatcagccactacgagtgctgcaggatcataacgtagcgaacgagagagaagtc
ttggacaagtgcatccttgcccagaagaccgccaagtacgcgtacatcaaagggagggaa
gaccgcacaccctgcgagactaaacggtgcctacacgaacaaacaggcgagctgtactct
ctacgtgagtgtgcaaaacagcaaaacaaaaagaaaagggctaccgacacagaggcaacc
atcaacggcggctgctcccaccagtgcgccaaccacaagggccactacacctgcctctgc
cccgagggctacgcgctggcggcggacaatcacacctgcgtggacgttgacgagtgccag
ctggacaacggctcgtgcagctacaagtgcgtgaacaaagaagggggttacgagtgccac
tgcccgttcggaatggctctcagcggagacatgtccacgtgcaaggacgaggacgagtgt
gccaccgacaacggaggatgtagccacgagtgccacaacacacgaggctcctacaggtgc
gagtgccccaccggataccgccttgctagtgacggttcctcctgtgaagatatagacgag
tgttctgtggccaacggaggatgctctcacacctgcgtcaacagagaggggtcgttcctg
tgcacctgcccaagaggttatgagatatctgaagatccttacaaatgccttgacgtgaac
gagtgtgccaaagccccctgtgaacacgagtgcttcaacaccccaggctcctactactgt
gcttgcaggcccgggttcaagccgaagccagacacctctcaccagtgctgggatgtgaac
gaatgcgacgaggataacggaggctgcgcccaggactgcttcaactccctcgggtcctac
cactgcggctgctcggtggagtatctgatcagcgaagacggccactcctgtgatctgaaa
cccgtgttctgcccggtgatcgtggcgcctctgcacggggaaatggtatgctcgaaggac
ctcgtgggcggagcataccctatgggaaccacctgcacttttacctgttccgaaggggcg
gcgctgcacgggaatgccaataccacgtgcagccaatcaggaacttggtctaataaccct
gtcacgtgtcaagctgtgaaatgctcagccctggcggaggtggagcacggccgcgtgtcc
cccgaccgctgcacccgccgtacctcgagcgtgggccagcactgctacctctcgtgctcg
ccggggtaccgcgtcgtcgggaaccccgtccggacgtgccaacctgccgggacttggtca
cccgatgccgtgaccccgtattgcgagaaagacaccctgcggcccttcatccagtgcccc
ggcgacttctccgtggacttggcgccccaccagagctcctcctacgtcaggctcccgcag
ccgaaggccaacgtcgactggttcagatacgtggacgcctctcccagctgggccaagcag
ctggaggcggaccttcctgctggcaagacgacggtcaccttcatagctcgctcgccgctg
tccgaggagaccgccgcctgctccttcgtcgtggaggtcatcgacaaagaagagccccaa
gttttcggctgccccaagtccttcctggtccacctggctgacggtgaggcgagctccgaa
gtcacgtggaaggaacccgtgtttaaggacaacgtggagattgctcacctgtggaagtcg
atggaacccgggaagaagctgaccgcagggacgtatccggtgcattacgtggccatggat
ccgtacagaaatcgggctaagtgttcctttaccgtgactgtccaggcagctgtggttggg
cttaataagcagtgccgagagccagggcagctggttggtgggcactgggtatgctcagag
ctggcctgggggcggatgtgtcgacctgcgtgtcagcaaggcttcgtcatgatcaaaaaa
tcttcctccccaatttacatatgcgcgtcctccactggcctctggacccccagctcggaa
ttccccgcatgcacgcccacagtttccttccgaccaagtactggctgtctgcccgggttt
gaacggaggaaaacccatcctgatgtatgcttggcgtgtaccccagggatgcaccgtagt
tcgaggcagcggcagtgtactccatgcccactgggaacatacactgacaacttcgcaagc
caacgatgcaagcagtgtcccgacggatccacgacagctgacccggggcccactcggacg
ccctttgtcttttcgccgttgaatgggccgagagcgccgcccgtgcacagactgaacaac
gaaagaaagtatgggaagaacgcaaaacgttttcgtggacgtaatcccgtcagaggcgac
ttggcatcgacctaccacgagcaagctgcagcgtcctcctcggcagcggcacacttcctg
cagagtttccccttttccgccctcccgcccggcaccacgatggccctggcacacgcccat
gtcaggggaaggtcgaattcccacgcacaagcccatgcccaggctggcatctatagcttc
ggctaa
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integrated database retrieval system
