Penaeus vannamei (Pacific white shrimp): 113827965 Help Entry 113827965         CDS       T06111                                  Name (RefSeq) DNA ligase 4-like   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism pvm  Penaeus vannamei (Pacific white shrimp) Pathway pvm03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pvm00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     113827965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pvm03400]     113827965 Enzymes [BR:pvm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      113827965 DNA repair and recombination proteins [BR:pvm03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      113827965 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C BRCT RNA_ligase DNA_ligase_IV LIG3_BRCT mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  113827965 NCBI-ProteinID:  XP_027236720 LinkDB All DBs Position Unknown AA seq 885 aa AA seqDB search MSDSKPIAAIIPWSQVCRMLDKVQTAIKAAKKEMLVKFIIQFRDLLKKKLEKDPQSTDSF FPVLRILLPALDRARGAYGVKERKLAELYIRILGLKKEGNDAQKLLHFRKPKSEGGGETG DFAEVAYYVLRSRCDDKGNMTLLDVDIQLTSIAENYAAKKHEDVEKSLLMMLRKMTATEQ KWLIRVLLKDMKLGIGQGTIFNAWHPDAKDYFDVNNSLEKVCKTLRDPTVRLHEIEVSLF SAFRPMLAERAVLEKVDTQMDHKTYYAETKYDGERSQIHKNKNSYKYFSRNGFEFTNNFG GDPNSGLFTPHLHGQFLPHVKDIILDGEMVGWSKKHGAIVSKGEHLDVKNLKEDGDLQVC LVLFDIIYLNGQVLTNLPLSERLEKLKTVLIPLEGRIQFSAKVEVTTKEDVIRVLNEAID NREEGVVLKNPDSIYSPASRKGGWIKVKPEYVDSLVSELDLLIIGAYYGSGRRKGVLSHF LLGVAVPSNEVGGKPTEFHSFCRVGSGYTFAELGDLVAKLSPHARKGQAPPGVFVTREKP DLWINPAKSCIVQVRAAEVVKSEMYKTGVTLRFPRVEKVRYDKPWYDTLTTKELDSLVKE ASGKLATKHLLDISDEPPLKRKALPKVEQISLPMHFRPADLSRVVKKDELFSGLEMCIMS GDEDYTKQQLEKIVVEHGGSLTQHPGGNTYCIITDTRSVRVNNYIATSTYNVIRPSWVIS CKAKCCLVPWGPLDAIHVMEKEKKRMEELYDKFGDSYYEPTDEKTLKRVMENMKKEDCIP LTVEEMREFDEALCEMDETRALFRPVTAVFMDGEGQELASLALRLHGGFVKKSSSGVTHI VVSDKEESNSRIRPSEYQGQHLVTSKWVYDCIDKCKLLEERYYMP NT seq 2658 nt NT seq  +upstreamnt  +downstreamnt atgtcggattctaaacctattgcggcgatcataccctggtcgcaggtatgtcgcatgctg gacaaagtacagactgctatcaaggctgccaaaaaggaaatgttggtcaagttcatcata cagtttcgtgatcttcttaaaaagaaactagaaaaggatccccagtctaccgacagtttt tttcctgtgcttcgcatcctgctaccagctcttgacagagcccgaggagcctatggtgtc aaggaacgtaaacttgcagaactttatatccgtatccttggtttgaagaaagagggtaat gatgcacagaagcttctgcattttaggaagccgaaatcagaaggaggtggagagactgga gattttgcggaggtggcatactatgttcttaggagtcgctgtgatgacaagggcaacatg actctcttggatgtagacatacaactgacttccattgctgaaaattatgcagcaaaaaag catgaggatgttgaaaaatctctgctcatgatgctaaggaaaatgacagcaacagagcaa aaatggcttattcgtgttctcctgaaggacatgaaactaggcattggccagggtacaatc tttaatgcctggcacccagatgcaaaagactattttgatgtgaataacagcttggaaaaa gtatgtaaaactctgcgagatcctactgttcgtctccatgaaatcgaggtgtccctcttt tctgccttccgtcccatgctggctgaacgtgcagtgctggagaaagtggacacacagatg gaccataagacttactatgctgaaaccaaatatgatggggaacggtcccagattcacaag aataaaaattcctacaagtacttttcacgaaatggctttgaattcaccaacaattttgga ggtgacccaaacagtggcctctttacaccacacctccatggccagttccttccccatgtg aaagacattatccttgatggggagatggtgggatggagcaagaaacatggtgctattgtt agcaaaggagaacatttggatgtcaaaaatctaaaagaagatggggacttgcaggtttgc cttgtcctctttgacatcatttacctgaatggccaggtgttgactaatttgcctctgtcg gagaggcttgaaaagctgaagactgtgctcataccattagagggaagaatccagttctct gcaaaggtggaggtcacgacaaaggaagatgtcatcagagtcttgaatgaagccattgac aatcgagaagaaggagttgtgctgaagaacccagattccatttacagccctgcttctcgg aaaggaggttggatcaaagtcaagccagagtatgtggactccttggtctcagaacttgat ctactgatcattggagcgtattatggatcgggaaggcgcaaaggggtgctctctcatttt ctgctgggtgttgctgtccccagtaatgaagttggaggaaaacctacagaattccactca ttctgccgtgtcgggtcaggctacacctttgctgaacttggtgacctcgtggctaagttg tctccccatgccaggaaagggcaagctccccctggggtctttgtgaccagggaaaagcca gatctgtggattaatcctgcaaagtcatgcattgtgcaggtaagagctgcagaggtagta aaaagtgaaatgtacaaaactggagtgactctgaggttccctcgtgtggagaaggtccgt tatgacaagccttggtacgatacacttacaacaaaagaattggattcacttgttaaggaa gcatctggtaagctggccacaaagcaccttctggatataagtgatgaacccccactcaag cgtaaagcattgccaaaagtggaacagatatcccttcctatgcacttccgtccagctgac ttatcgcgggttgtcaaaaaagatgaattgttcagtgggctggagatgtgcataatgagt ggtgatgaagactacaccaagcaacagctggagaagattgtggtagagcatggtggttcc ttgactcagcacccaggagggaacacatattgtatcatcacagacacaaggtctgttcgt gtcaacaattacatagcgacttctacttataatgttattcggccatcatgggtcatttcc tgtaaagccaagtgttgcctggtaccatggggtcccttagatgccatacacgtcatggaa aaagaaaagaaacgcatggaggagttgtatgataaatttggtgacagctattatgaaccc acagatgagaagacactgaaaagagttatggagaacatgaagaaagaggactgtattccc ctcacagtggaggaaatgcgtgaatttgatgaggcattgtgcgagatggatgaaacccgt gcattgttccgtccagtcacagcagtatttatggatggggaagggcaagaactagcctcc cttgcccttaggcttcatggtggttttgttaagaagagttcgtctggggtgacacatatt gttgtgtcagacaaggaggaaagtaactccagaatacggccaagcgagtaccagggacag catctagttacatcgaagtgggtgtacgactgcatcgataaatgcaaacttttggaagag cgctattatatgccatga

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