Pogona vitticeps (central bearded dragon): 110090935
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Entry
110090935 CDS
T05000
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110090935 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110090935 (LIG4)
Enzymes [BR:
pvt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
110090935 (LIG4)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110090935 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
110090935
NCBI-ProteinID:
XP_020670483
UniProt:
A0A6J0VE31
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MSSALASHSASQLTVASQVPFVDLCSTLERIQKCKSRPEKTRHFKDFLDSWRQFHDALHK
NQKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTP
TGSQREAGDFAIIAYFVLKPRCLKQGQLTIEQVNTLLDSVSNNNAAKRKDLVKKSLLQLI
TQTSALEQKWLIRMILKDLKLGISQQTIFSIFHPDAAELHNVTTDLEKVCRQLHNPSVCL
SDVSITLFSAFKPMLAAIANIQQIEKQMNNQSFYIETKLDGERMQMHKDGDVYKYFSRNG
YDYTQQFGASPLEGSLTPFVHNVFKDNVQNCILDGEMMAYNPTTEIFMQKGSRFDIKRMV
DESELQTCFCVFDVLMVNDQKLGHEMLSRRYEILNKIFTPIPGRMQVVLKCQASTRKEVV
DALNEAIDNREEGIVVKDPMSTYKPDKRGDGWLKIKPEYVSGLMDELDLLIVGGYWGKGL
RGGMMSHFLCAVAETPPTGEKPSVFHSICRVGSGYTMKELYDLGLKLAKYWKPYHKRDPP
CNILCGTEKPEVYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIERIREDKEWHECMT
LNLLEQLRGKASGKLATKHLDIDIDKPQEKKRKTVSKVKKKIGLIDHFKAPDLANIYKIS
NMFEDIEFCVMTGAENYTKCELESKIVECGGSIVQNPGVDTYCVVAGTENVRVKNIISSN
KYDVVRVEWLLQCFQTKAFVPWQPACMIHMSPETKEHFACVYDCYGDSYTVDTDMVQLKE
VFSRMNNVGEKISWDVIADTEARYLWDCSLLNLFRQHIIYLDPLDEVSTSDTKMTQKRWL
TVALILRFHGAQVVSQLKEGVSHVIIRNHVNLERLKTVRRNFERKFKIVSEQWVKDSIKA
GQLQNENIYLM
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcccttgcttcacattctgcttcccaactaactgtggcatcacaagttcct
tttgtggatctgtgttcaaccttagaacgaatacagaaatgcaaatcccgaccagagaaa
acaaggcatttcaaggattttttagattcctggaggcagtttcatgatgctcttcataaa
aatcagaaggatgtgaccgactcattttatcctgcaatgagacttattctgcctcagctg
gaaagagagaggatggcttatggaattaaagaaactatgcttgctaagctctatattgaa
ctgttaaatttacccagagatggaaaagatgcattaaaacttttaaattatcgtacgcct
actggttcacagagagaagctggagattttgctataattgcctattttgtattgaaacca
agatgtctcaagcaaggtcaactgaccatagaacaagtaaacactctgttagactctgtt
tctaacaataatgcagccaaaaggaaagacctggttaagaaaagccttcttcagttaatt
actcagacttcagcacttgaacagaaatggttgatcaggatgatcttaaaagatttgaag
cttggtataagccagcaaaccatattttctatcttccatcctgatgctgcagagctgcat
aatgttacaactgatttggagaaggtttgtaggcagttgcacaatccttctgtatgtctt
agtgatgtctcaattacattattttctgcctttaaaccaatgcttgctgctattgccaac
atacaacaaattgaaaaacaaatgaataaccaaagtttctatatagaaaccaaattagat
ggtgaacgaatgcagatgcataaagatggagatgtttacaagtatttttctcgaaatgga
tatgattacactcaacagtttggtgcatctccccttgaaggctcactgactccatttgtt
cataatgtctttaaagataatgttcagaactgcattttagatggtgaaatgatggcctac
aatcccaccacagagatcttcatgcagaagggaagcaggtttgacatcaaaagaatggta
gatgaatctgaattacagacatgcttctgtgtatttgatgtcttaatggttaatgatcag
aagctgggtcatgagatgctgagcagaaggtatgagatactcaataagatatttacacca
ataccaggtcgaatgcaggttgttcttaaatgtcaagccagcactaggaaggaagtagtg
gatgctctaaatgaagctatagataacagggaagaagggattgtggtgaaagaccccatg
tcaacttacaagccagataaacgtggggatgggtggctgaagatcaaaccagagtatgtc
agtggactgatggatgaactagaccttttaattgttggaggctactggggaaaaggcctt
cgtggtggcatgatgtcacattttttatgtgctgttgctgagactcctccaactggagaa
aaaccttctgtgtttcattccatttgccgtgttggttctggttacacaatgaaagaactg
tatgatcttggcttgaaattagcaaaatactggaagccctaccataaaagggatcctcct
tgtaatattctgtgtggcactgagaaacctgaagtctacattgaaccttgcaattcagtc
atagttcagattaaagcagctgagattgtgaatagcgatatgtacaaaactgactgtaca
ttacgtttccctcgaattgagagaataagagaagataaagaatggcatgaatgcatgact
ctcaaccttttagaacaactcagagggaaggcttctggaaagctagcaactaagcatctt
gatatagatattgataagccacaggaaaaaaaacgtaaaactgtgtcaaaggttaaaaag
aaaattggtttaatagatcattttaaagcccctgatcttgctaatatatacaaaatttcc
aatatgtttgaagatattgaattttgcgttatgactggggcagaaaattatacaaaatgt
gaactggaaagtaaaatagtggaatgtggtgggagcatagtacaaaatcctggtgtggac
acttattgtgttgttgcaggaactgaaaacgttcgtgtgaaaaatattatttcttctaac
aagtatgatgtagtgagagtagaatggcttttacagtgctttcagaccaaagcatttgtg
ccctggcagcctgcttgcatgattcatatgtccccagaaacaaaagaacacttcgcttgt
gtttatgactgctatggtgatagctatacagttgatactgatatggttcagttgaaggaa
gtattctcaagaatgaataatgtgggagaaaagatctcttgggatgtgattgctgataca
gaagcacgctatttatgggactgctctctgttaaatttgttcagacagcacatcatttat
ctggatccattggatgaagtgagcacctcagatactaagatgactcagaaaagatggttg
actgtagcgctaatacttcgatttcatggagcacaagtagtctcccagctgaaggagggt
gtgtcgcatgtaatcattagaaaccatgttaatttggaaaggctaaagacagtcagaaga
aattttgaaaggaagtttaaaattgtatctgaacagtgggtaaaggattccataaaggca
gggcagttgcaaaatgaaaatatttacttaatgtag
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