Phaseolus vulgaris (common bean): PHAVU_001G268800g
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Entry
PHAVU_001G268800g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
PHAVU_001G268800g
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvu01002
]
PHAVU_001G268800g
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvu04121
]
PHAVU_001G268800g
Enzymes [BR:
pvu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PHAVU_001G268800g
Peptidases and inhibitors [BR:
pvu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PHAVU_001G268800g
Ubiquitin system [BR:
pvu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PHAVU_001G268800g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
18642680
NCBI-ProteinID:
XP_007163841
UniProt:
V7D2S4
LinkDB
All DBs
Position
1:complement(52037542..52042355)
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AA seq
978 aa
AA seq
DB search
MGKKVRKKSRGSAKEKVVATHLPKKVIESTNPTVESVDEGVLIPKETKLCPHLVKGVNLS
RLSTKVESCGSVRCEDCIEGATDRRSGKGKGKHGKKKGGASLDSKSETKSIWVCLECGQY
TCGGVGLPITPHCHVVGHARKNRHHLVVHFDKPQLCWCFPCSMLIQVDNIEKTDESSHLL
SDVVKLLKGRSQEKSSVDIEDVSAGDGSITSDIKSRALFTNDSTVQGGYVVRGMLNLGNT
CFFNSVMQNLLAMNRLRDDFLKLDAPVGPLISSLKKLFTETNPVSGLKNVINPRSFFGCV
CSKSPQFRGYQQHDSHELLRCLLDGLSTEELAGRKQNGFPKRDGTSSNTLVDALFGGQIS
STVCCIECGHFSTVYEPFLDLSLSVPTKKPPLRKAQQVPRTKKGKLPAKKGGKTRVKVNR
DTDPSPVQTLSSQLTSHQSYCPDQSAAGEMGTSSGYSTLLGSEQINSVANKEELSSSNLV
IAGEPQRKQVLENGAMKTSEDFSWLDYVEAGTMIHECDFISQKEDAPVVQDTESKDECSN
EFRGQPSSESNGPVCFPKDDQNLRPEFSSANGWEDEVPLQVQDSEVLLLPYKEESSSAAE
LIGGDGEASSSVLGGRPEELEFDGFGDLFNEPEVVAGPAPRPSSCSEGMEASFIIGSNSE
SDPDEVDDTDSPVSVESCLAHFIKPELLSDENAWHCENCSKVLRQKMEKEKQARAVSDGN
ESGIHDEPRHAVNSCSVNVRTNGNGSIKNHQNIESLVSRDKHDTKLENGQRDELSLVLNE
RDSGAFEMEGTHNDELQSSRFHNVCDEESCSNLDADSCTAENVQRNSPMIDNDNNESEDA
DSNSVKVKRDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFREKMDIRPYIDP
RCIIEEKYEYQLVGLVEHSGTMRGGHYVAYVRGGHRNSGKENEGSTSTWYQASDAYVREV
SLDEVLRCEAYILFYEKA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaagtcagaaagaagagtcgtggttctgccaaggagaaggtggttgctacc
catttgccaaaaaaggttattgaatcaaccaacccgaccgtcgagtctgttgacgagggc
gtgttgattccaaaagagacaaaactttgccctcatctcgttaaaggtgttaatttaagc
agattgtccaccaaggttgagtcttgtggatccgtaaggtgtgaagattgtatagaaggt
gccactgatagaaggagtggtaaaggaaaaggtaaacatgggaagaagaaaggtggtgca
tcactagattcaaaatctgagacaaagtctatatgggtttgtttggagtgtggtcagtat
acctgtggaggcgtggggctaccaataacccctcactgccatgtcgtagggcatgcgagg
aaaaaccgtcaccacttggtggttcattttgataagcctcaactgtgttggtgttttcct
tgcagcatgcttattcaagttgataatattgaaaaaactgatgaatcgagtcatcttctt
tctgatgttgtgaaattgttgaaaggacgatcacaagaaaaatcttcagtggatattgaa
gacgtttccgctggggatggcagtattacttcggatattaagtcaagagctctgttcaca
aatgattcgactgtacaaggtggttatgtagttagaggtatgcttaatctggggaatact
tgcttcttcaattcagtcatgcaaaatctgctggccatgaatagattgcgggacgacttt
ctaaagttagatgctccagtcgggccacttattagttccttgaagaagcttttcactgaa
acaaaccctgtatcaggattgaaaaatgttataaatcctagatccttttttggctgtgtc
tgttctaagtctccccaatttcgaggatatcagcagcatgacagtcatgaattgctccgt
tgtttactcgatggtttaagtactgaagaactggctggaagaaagcagaatggttttcca
aagagagatgggacctcttccaatacgttagttgatgctttatttgggggtcagatatca
agtactgtatgctgcatagaatgtgggcatttctcaacagtgtatgaaccttttttagat
ctttcactttctgttccaactaagaaacctcctcttcggaaggcccaacaagtacctcga
accaagaaaggtaaacttccagcaaaaaaaggaggaaaaactcgagtaaaagttaacagg
gatactgatccctcacctgttcaaactctatcaagccaattaaccagccaccaatcatat
tgccctgatcagtcagctgccggagagatgggaacttcttctggttattcgacattgtta
ggttctgaacaaataaacagcgtggctaataaagaggagttgtcttcatctaatttggtt
attgctggagagcctcaacgtaagcaagttcttgaaaatggtgcaatgaaaacatcagaa
gatttttcatggttggattatgtggaagctggaacaatgatacatgagtgtgattttatt
tcccaaaaggaggatgctccagtggtacaggatactgagagcaaagatgaatgttcaaac
gaattccgtggacagcccagcagtgagtccaatggtcctgtttgtttccctaaggatgat
cagaacctaagacccgaattttcttcagcaaatggatgggaagatgaggttccattacaa
gttcaagattcagaagtgctgttacttccatacaaagaagaaagttcctcggctgctgag
ctcataggaggagatggcgaggcctcctcgtcagttttgggtggtcgtccagaagaattg
gagtttgatggctttggtgacttattcaacgagcctgaagttgttgctgggcctgctcct
agaccatcttcatgtagtgagggcatggaagctagttttatcattggaagtaatagtgag
tccgatccagatgaagtagatgacacagattctcctgtctctgtagagagttgcttggca
cattttataaaacctgagcttctctcggatgaaaatgcttggcattgtgagaattgttca
aaagttctccgtcaaaagatggaaaaagaaaagcaggcaagagctgtatctgatggaaac
gagtctggtattcatgatgaaccacggcatgcagttaattcttgttctgttaatgtcaga
accaatggaaatggtagcataaaaaatcaccaaaacatagaaagtttagtctcacgggat
aaacatgacacaaagcttgaaaatggtcaaagggatgagcttagtttagtccttaatgaa
agggacagtggggcattcgaaatggaaggtactcataatgatgagttacagtcgtcaagg
tttcataatgtttgcgatgaagaaagctgcagtaatttagatgctgattcgtgtactgca
gaaaatgtccaaagaaattctccgatgatagataatgataacaatgagtcggaggatgcg
gactccaacagtgtgaaagtgaagagggatgcaaccaagagggtcctcatatataaagct
ccgcctgtcttgacgattcatttgaagagattcagccaagatgctcgtggtcgcttaagt
aaattaaatggccatgtcaatttcagagaaaaaatggatattagaccatatattgatccc
aggtgcataattgaagagaagtatgaataccaattggttggtttagtggagcattcggga
acaatgagaggaggtcactatgttgcctatgtgagaggggggcacaggaacagtgggaaa
gagaatgagggttccacttccacatggtatcaggcaagtgatgcatatgtgcgtgaagtt
tcccttgatgaagttcttcgctgtgaggcatacattttattctacgaaaaagcttga
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