Phaseolus vulgaris (common bean): PHAVU_002G037900g
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Entry
PHAVU_002G037900g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHAVU_002G037900g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
PHAVU_002G037900g
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHAVU_002G037900g
Spliceosome [BR:
pvu03041
]
Complex A
U2 snRNP components
U2 related factors
PHAVU_002G037900g
Complex B
PHAVU_002G037900g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18636860
NCBI-ProteinID:
XP_007157031
UniProt:
V7CJE2
LinkDB
All DBs
Position
2:3663450..3668769
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AA seq
1129 aa
AA seq
DB search
MDEGKHRSRKEIHEVKDGDSKRSHRDRDRDRTGERGKDKNDGRHRDREKRDRESRKPERE
RSTDSEEKHDRDREKRKDKDKDVERERGREKKRERDREDREKTDRVKEKEKERERKEDKE
RIRERERERRDHEREKEKERERARRAREREKRREVDSDYSDGESRERDRKRHRKEDGYYK
KRERERSVSKPSRQSEEHEGSPRKKSVGDDSDTKDGEIKPTREEEMENEQKRLDEEIEKR
RRRVQEWQELRRKKEEAEREKHGEVSANEPESGKTWTLEGESDDEEGPGTEKQDTGMDVD
EDDKPADMEPKDVMEVDTDNGTIASDLQEGTAGTPEDDEIDPLDAFMNSMVLPEVEKLNN
AVTSVISDKAVDIKAKDKGNEQSRGTQSRKGSNKSIGRIIPGEESDSDYADDEVERDPLD
EDDDEFMKRVKKTKAEKLSLVDHSKIDYEPFKKTFYIEVKEMSKMTPEEAAVYRKQLELK
IHGKDVPKPIKSWHQTGLGSKVLETIKKMNFEKPMPIQAQALPVIMSGRDCIGIAKTGSG
KTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKILGLRCVPVYG
GSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEP
QIARIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDILQLVEVRP
DNERFLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAKDQTDREST
ISDFKSNVCSLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAIT
FISEEEARYAPDLLKALELSEQTVPNDLKTLADGFMAKVNQGLEQAHGTGYGGSGFKFNE
EEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDISQHPAFAQILAATKVNAPAL
PTPISAAQLISNGGLPVSFPSVLGLQTPAVLPGTGLPLAANDGAARAALAAMNLHRNIEK
IQSEALPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQFFPPGKIPGPG
ERKLYLFIEGPTEQSVKTAKAQLKRVLEDITNQALQLPGGNQPGKYSVV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggaaagcatagatcgaggaaagaaattcatgaggtgaaagatggggattct
aagaggagtcaccgcgaccgtgaccgtgatagaactggagaaaggggtaaggataaaaac
gacgggaggcacagggatagggagaagagggatcgtgagtcacgaaaacctgaaagagag
aggagtactgattctgaagagaagcatgatcgagacagggagaagcgcaaagataaagat
aaggatgtggagagagaaagaggtcgagagaagaaaagggaaagggatagggaagacagg
gagaagacagacagagtaaaggaaaaagagaaagagagggaaagaaaagaagataaggag
aggattagagagagggaaagggaaaggagggatcatgagagagagaaggaaaaggaaaga
gaaagggcgaggagagcacgagagagggagaagcgtagagaagttgatagtgattacagt
gatggtgaatctagggagagggatagaaagcggcacaggaaggaagatggttattacaag
aagagagagagggaaagaagcgtcagcaagccaagcaggcaatctgaggaacatgaagga
agcccaagaaaaaagagtgttggagatgattcagataccaaagatggagagataaaacct
acccgtgaagaggagatggaaaatgaacagaagaggttggatgaagaaatagaaaagcgg
aggaggagagttcaagagtggcaagagctgagaaggaagaaagaagaagcagaaagagaa
aagcatggtgaagtaagtgctaatgaacctgagtctggaaagacctggacactagaaggg
gaatctgatgacgaagaaggaccgggaacagagaagcaagatacaggtatggatgtagat
gaagatgacaaacctgctgatatggaacctaaggatgtgatggaggtagacacggataat
gggacaattgcatctgatttacaggagggaactgctggtacacctgaagatgatgaaata
gatccattggatgctttcatgaattctatggttctacctgaagttgaaaagctgaacaat
gctgtgacatcagtaatttctgataaagccgttgacataaaagccaaagataaagggaat
gagcaaagtcgtggtacacagtcaaggaaaggttcaaataagtctattggcagaataatt
cctggtgaagagtctgactcagattatgctgatgatgaagttgagagggatccattggat
gaagatgatgatgagttcatgaaaagagtgaagaaaaccaaagccgagaagctttcttta
gttgaccactcaaagattgactatgaaccattcaagaaaactttttatattgaagtgaag
gagatgtcgaagatgactccagaagaagctgcagtatacaggaagcagttggaattgaag
atacatggaaaggatgtgccaaagcctataaaatcatggcaccagactggacttggtagc
aaagttttggagacaataaagaagatgaactttgaaaagccgatgcctattcaagctcag
gctctccctgtaatcatgagtggccgagattgcatagggattgctaaaactgggtcaggc
aaaacacttgcttttgttctgccaatgctgaggcatatcaaggatcagccaccagttgtt
gccggagatggacctattgggcttattatggcccctacaagggaacttgttcaacagatt
cacagtgatataaaaaaatttgctaagatactaggtctcaggtgcgtgcctgtgtatgga
ggctccggtgttgctcaacaaattagtgagttgaaacgtggtgctgagatagtggtttgt
actccaggtaggatgattgacatattatgcaccagtagtggaaaaataactaacttgcgt
agagtcacttatctggttatggatgaggctgatcgaatgtttgacatgggctttgaacct
caaattgcacgaattgttcagaatattcgtccagatcgtcaaacagttcttttctctgca
actttcccccgccaggttgaaattctggctcggaaggttttgaataaacctgttgaaatt
caagttggcgggaggagtgtagtgaacaaagacatattacagctagttgaggtgagacca
gataatgaaaggttccttagactcttagaaatattgggggaatggtacgagaaaggaaag
atcctgatatttgttcactcccaggagaaatgtgatagtttgttcaaggatctgctcagg
catggttatccatgcctttctcttcacggggctaaggaccagacagaccgagaatccaca
atatctgactttaaaagcaatgtctgcagtttgttggttgcaacaagtattgctgccagg
ggattagatgttaaggagctagaattagtgatcaattttgatgttcctaaccactacgaa
gattatgtacaccgagttgggcgcactggacgagctggtcgaaagggttgtgccattaca
tttatatctgaggaagaggcaagatatgcacctgatctgctgaaagccttggaattatct
gagcagactgttcccaatgatctgaaaactcttgctgatggctttatggcaaaggtgaat
caaggactggagcaagcccacgggactggttatggaggcagtggctttaaatttaatgaa
gaggaagatgaggtgaggagagcagcaaagaaagcacaagccaaggaatatgggtttgaa
gaagacaagtcagattccgaagatgaagatgaaggtattcggaaggcaggaggtgatatc
tcacagcatcctgcttttgctcagattcttgctgccactaaagttaatgctcctgcattg
cctactcccatctctgctgctcagctgatttctaatggaggactgcctgtttcttttccg
tctgtacttggtctccagacccccgcagtcttgcctggtactgggctaccccttgctgca
aatgatggcgcagctcgagcagctctagctgctatgaacttgcatcgcaacatagaaaaa
atacaatcagaagcattaccagagcattatgaggctgagttggaaataaatgatttcccc
cagaatgctcgctggaaagttacgcataaggaaacattaggccccatatctgattggact
ggagctgccattaccaccagggggcagttcttcccacctggaaaaatcccaggacctgga
gaacgcaaactctacttgttcattgaaggtcctaccgagcagtctgttaagacagctaaa
gcacaattgaagcgtgttttggaagacatcacaaatcaggctttgcaacttcctggtgga
aatcaaccgggcaaatactctgttgtataa
DBGET
integrated database retrieval system