KEGG   Phaseolus vulgaris (common bean): PHAVU_005G000800g
Entry
PHAVU_005G000800g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
pvu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHAVU_005G000800g
   03015 mRNA surveillance pathway
    PHAVU_005G000800g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    PHAVU_005G000800g
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     PHAVU_005G000800g
   mRNA cycle factors
    P-body specific factors
     PHAVU_005G000800g
SSDB
Motif
Pfam: Smg4_UPF3 SRP-alpha_N RRM_2 NiFe-hyd_HybE
Other DBs
NCBI-GeneID: 18629622
NCBI-ProteinID: XP_007148607
UniProt: V7BVL0
LinkDB
Position
5:complement(59029..68122)
AA seq 539 aa
MMEERKMKVRSEREKTKVVIRHLPPSLTQSDLFQHIDSHFDSRYNWFSFRPGNTSLKRQR
HSRAYIDFNSPHDVFDFAHFFHGHVFVNERGAQHKAIVEYAPSQRVPKPTTKKDGREGTI
YKDPDYLEFLKLIAKPHEHLPSAEIQLERKEAEQAGANKETPIVTPLMEYVRQKRAVDTG
MQASSAVAKVSRRSRAALPGKPGSGNTKRGSEKKKYVQKDNAKSAARKESKDKSAFIVVP
RREDLSAESSMKGISEIEALHGIEGPISGIPLSSDSGKKKILLLKGKQREIPSATEGTVK
QQIVQSGNSPISTPAKQNQRRENSGRLIRSILLNNESRQSQSITGTQHKIQILSSENGKR
PPRSFGSRSGLNDQHPNHDIAQVNSDGDSKRALDEKFVKRDPHGLGSGEKTEKRTRNKDR
PDRGVWTPLRRSDVSHAGSDYSSSSMAQPTLSNPESAEGELKENVTSGNRGSEFSASAGG
RGNPSIENGSQRNFARRGASYVVKDDGAVSISEGKPSKKSVGHSAHEKQVWVQKSSSGS
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgatggaagaaaggaagatgaaggttcgttccgaaagggagaagacgaaagtggtgatt
aggcatttgcctccttctctcactcaatccgatctcttccaacacatcgactcacacttc
gattcacgctacaattggttctctttcagacccggcaacaccagcctcaagcgtcagagg
cattcccgagcctatatagacttcaattctcctcatgatgtgttcgactttgctcacttc
ttccatggacatgtttttgttaacgagagaggtgctcaacataaagctattgttgagtac
gccccttcccagcgtgttccgaagcctactaccaagaaggatggacgtgaagggaccata
tacaaagatcctgactatctggagttcctcaaactcattgcaaagccacatgaacatctt
cccagtgcagagatacaattggaaagaaaagaagctgaacaagctggggctaacaaggaa
acacctattgtcacacccttgatggaatatgttcgacagaaacgagctgttgacactggt
atgcaggcttcctcagcagtggcaaaagttagcagaagatccagagcggctttgcctggc
aagcctggctcaggcaatactaaacgaggatctgaaaagaaaaagtatgttcagaaggac
aatgccaagagtgctgctcgcaaagagtcaaaagataaatcagcctttattgtggttccc
cggcgagaggatctatcagctgaatcaagtatgaaaggaatttctgaaattgaagcattg
catggcattgaaggtcccatttctggaattccactgtcttctgactcaggaaagaaaaaa
atccttcttctgaaagggaaacagcgggaaattcccagtgccactgagggtacagtaaaa
cagcaaatcgtacaatctggaaattctcccatttcaactcctgcgaaacagaaccagaga
cgtgaaaatagtggaagattgatcaggagcatacttctaaataatgaatctcgtcaaagt
cagtctattactgggacacaacataaaattcaaattttaagctcagagaatgggaagaga
ccacctcgttcttttggctcaaggtctgggttaaatgatcaacatccaaatcatgatatt
gcacaagttaattctgacggggattctaaaagggctttggatgaaaaattcgtaaaaagg
gatcctcatggtttaggtagcggtgagaaaacagaaaagcgtactagaaacaaggataga
cctgatcgtggtgtttggacaccccttcgtcgttctgatgtttcacatgctggtagtgac
tactcgtcatcctcaatggcacaacctactctgtcaaatcctgaatctgctgaaggagaa
ctaaaagaaaatgttacttctgggaacaggggcagtgaattctctgcttctgcaggtgga
agaggcaatccttctattgagaatggttcccaaagaaattttgcacgccgtggagcttcc
tatgtagtgaaggatgatggtgcagtcagtataagtgaagggaaaccttccaagaaaagt
gttgggcacagtgctcatgagaagcaagtctgggttcagaaatcttcttcagggtcttaa

DBGET integrated database retrieval system