Phaseolus vulgaris (common bean): PHAVU_011G061700g
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Entry
PHAVU_011G061700g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHAVU_011G061700g
03015 mRNA surveillance pathway
PHAVU_011G061700g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
PHAVU_011G061700g
03041 Spliceosome [BR:
pvu03041
]
PHAVU_011G061700g
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PHAVU_011G061700g
Spliceosome [BR:
pvu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
PHAVU_011G061700g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
18615324
NCBI-ProteinID:
XP_007132039
UniProt:
V7AGQ0
LinkDB
All DBs
Position
11:complement(5352857..5358982)
Genome browser
AA seq
924 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWVTRRVTELL
GFEDEVLINFIHSLLDVKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEELLKKKAENDRITSEIQRKKDKEGREIMEERFKKMDGGFDSKDNDSASAPNS
KSKDSGFDRDGKEPDKRNGVRARSRLSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSG
GRHRSKSISRSPVARGRSLSSEKIHHSPRRRSISPHRHSPRRSPHRRPLYLRRRSISRSS
YRSPSPIRRRMHSPVRRSSPFRRRRSPSPARRQRSPSPMRRQRSPSPVRRRRSPSPMRRR
RSPSPMRRRWSPSPVRRRRSPSPMRRHRSPLVRRRRSPSLGLRHRSPSPGHRHRSPSPLG
LRRSPGHRHRSPSPLGLRRSPSPRRRRSPIIQHRSPSPVRRIPPTSARNRLESPMQSSSP
IRRRYGSRTPPHSPSPLRHRSPVPSKNRSPSISPQRSPRDEWSSQSPIRHVSISPNRKNS
QRQQRSPLQSSIRRVRNISSPVGSVRRGKTSNYKSQESMSTPENSPNRSVSEEARSETSS
EGRSPHGSPMKQREKLASKRSLSPVKKQRTQKPSHESPKTRDEAEEAYYSRERRDPKMNS
SQKILKHSPASKRKGSPAKYGHEDEFSPERVAGHPASEQNNDWSKKGREIKRDKSSGKGN
EFPSQQKPSVNKETFSREKTRESYAVDIKKSDDNDQSRSNNAKSSDRHHKSEATPDLVGR
DDRVNQSASHDSISEESGKHRREGKDRRKHKRSEKRYASSDEDYSYDSDIEDRKEAKKRR
KEEKKLRKEDKRKRREERRRRREERRAEKLKLKSKTNNSSDDEEAERDYHQSDGEETPTE
QKKLEIELRNKALESLKAKRGMNN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttctttcgaggcacatctgccgaccaggacactcgtttttcgaacaag
caagcgaagctgatgaaatcacagaagtttgctccggaattggagcatctggtggacatg
acgaaggtgaatatggaagtaattaagccttgggtcaccagaagggtgaccgagcttctt
ggtttcgaggatgaagtgcttattaacttcatacacagtcttctggatgttaaggaggtg
aacgggaaggaagttcaaatacaaattactggatttatggaaaaaaacactggaaagttc
atgaaagaactttggacacttcttctcagtgcacagaaaaatgccagtggtgttcctcag
cagttcttggatgccaaggaggaagaacttttgaagaagaaggctgaaaatgatcggata
accagtgaaattcagaggaaaaaggataaggaaggtagagaaattatggaagagaggttt
aagaaaatggacggtggatttgattccaaggataatgatagtgcatcagctccaaattca
aagtcgaaggattcaggatttgaccgggatgggaaggaacctgacaagaggaatggtgtc
agggcaaggagcaggctttctaggtccccacattcacctgcagtttctacttcacctcat
cgaggctcaccctcaaggtcaatgagcaaatcattttcaaattcccgaagttattcaggt
ggtaggcacaggtcaaagagtatatctagatctcctgtagctcgaggacgctctctttca
tctgaaaagattcaccattctccacgaagacgatctatttctcctcacaggcattcacca
cgacgttctcctcataggaggccactttatttgaggagaagatccatatctcgctcaagt
tatagatctccttctcctatacgacgtagaatgcattctccagtccgtagaagttcacct
tttcgacgacggaggtcaccttctcccgcgcgacgacaaagatcaccttctcctatgcga
cgacaaagatcaccttctcccgtgcgacgacgaagatcaccttctcccatgcggagacga
agatcaccttctcccatgcgacgacgttggtcaccttcaccagtgcgacgacgcagatct
ccttctcctatgagaagacatagatctcctctggtgcgacgacgcagatcaccgtctctt
ggtcttcgtcatagatcaccttccccagggcacagacatagatccccatctccacttgga
ctacgaagatcaccaggccataggcatagatcaccatcacctcttggactacggagatca
ccttcacctaggcgacgaaggtctcctatcattcagcataggtcaccttctccagtgcgt
cgaattccaccaactagtgcacgaaatagattagaatctcccatgcaatcttcctctccc
atacgaagaaggtatggtagtagaactcctccacactctccatccccattgcgacatagg
tcacctgtacctagcaagaatagatctcccagtatctctccccagaggtctcctcgagat
gaatggagttctcagtctccaatacgacatgtatcaatctccccaaataggaaaaattct
caaagacaacaaagaagtcccttgcagtcttctataaggagagtcaggaacatatctagt
cctgtggggtctgtacgaagaggcaaaacttcaaactataaatcacaagagtcaatgtcc
actcctgagaactctccaaatcgttctgtatctgaagaagcaaggagtgagaccagcagt
gaaggtagaagtcctcatgggagccctatgaaacaaagagaaaagttagccagtaaaaga
agcttgagtcctgtaaagaaacaaagaacccagaaacctagccatgaaagcccaaagact
agagatgaagcagaagaagcgtactattccagagaaaggagagatcctaaaatgaactca
tcacaaaagatattaaaacactccccagctagtaagagaaaaggttcacctgcaaaatat
ggtcatgaggatgagttctctcctgaaagggttgctggtcatccagcttctgaacaaaac
aatgattggagtaagaaaggccgggagataaaacgggataagtcttctggaaaaggcaat
gaatttccttctcaacaaaagccatcagtgaacaaggaaactttttccagggagaagact
cgtgaatcttatgctgtagatattaaaaagtcagatgacaatgaccaatcccgttcaaac
aatgcaaaaagtagtgatcgtcaccacaaatccgaagccactccagatttagtcggaaga
gatgatcgtgtcaatcagagtgcatcacatgattctatttctgaggaaagtggtaaacat
agacgagagggaaaggacaggagaaagcataaaaggtctgagaaaagatatgcgtcttct
gatgaggattatagttatgattctgatatagaggacaggaaagaggctaagaagaggaga
aaggaggagaagaagttgcggaaggaggataagcgtaaaagacgggaagagaggcgtcgc
agaagggaggaacggcgtgcagagaagctgaagctgaagagtaaaacaaacaatagttca
gacgatgaggaagctgaacgagattatcatcaaagtgacggtgaagagacaccaactgag
caaaagaagcttgagattgaattacggaacaaggctcttgaatccctcaaagcaaagagg
ggcatgaataattaa
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