KEGG   Phaseolus vulgaris (common bean): PHAVU_011G061700g
Entry
PHAVU_011G061700g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
pvu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHAVU_011G061700g
   03015 mRNA surveillance pathway
    PHAVU_011G061700g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    PHAVU_011G061700g
   03041 Spliceosome [BR:pvu03041]
    PHAVU_011G061700g
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PHAVU_011G061700g
Spliceosome [BR:pvu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    PHAVU_011G061700g
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 18615324
NCBI-ProteinID: XP_007132039
UniProt: V7AGQ0
LinkDB
Position
11:complement(5352857..5358982)
AA seq 924 aa
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWVTRRVTELL
GFEDEVLINFIHSLLDVKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEELLKKKAENDRITSEIQRKKDKEGREIMEERFKKMDGGFDSKDNDSASAPNS
KSKDSGFDRDGKEPDKRNGVRARSRLSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSG
GRHRSKSISRSPVARGRSLSSEKIHHSPRRRSISPHRHSPRRSPHRRPLYLRRRSISRSS
YRSPSPIRRRMHSPVRRSSPFRRRRSPSPARRQRSPSPMRRQRSPSPVRRRRSPSPMRRR
RSPSPMRRRWSPSPVRRRRSPSPMRRHRSPLVRRRRSPSLGLRHRSPSPGHRHRSPSPLG
LRRSPGHRHRSPSPLGLRRSPSPRRRRSPIIQHRSPSPVRRIPPTSARNRLESPMQSSSP
IRRRYGSRTPPHSPSPLRHRSPVPSKNRSPSISPQRSPRDEWSSQSPIRHVSISPNRKNS
QRQQRSPLQSSIRRVRNISSPVGSVRRGKTSNYKSQESMSTPENSPNRSVSEEARSETSS
EGRSPHGSPMKQREKLASKRSLSPVKKQRTQKPSHESPKTRDEAEEAYYSRERRDPKMNS
SQKILKHSPASKRKGSPAKYGHEDEFSPERVAGHPASEQNNDWSKKGREIKRDKSSGKGN
EFPSQQKPSVNKETFSREKTRESYAVDIKKSDDNDQSRSNNAKSSDRHHKSEATPDLVGR
DDRVNQSASHDSISEESGKHRREGKDRRKHKRSEKRYASSDEDYSYDSDIEDRKEAKKRR
KEEKKLRKEDKRKRREERRRRREERRAEKLKLKSKTNNSSDDEEAERDYHQSDGEETPTE
QKKLEIELRNKALESLKAKRGMNN
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtcgggcggtttctttcgaggcacatctgccgaccaggacactcgtttttcgaacaag
caagcgaagctgatgaaatcacagaagtttgctccggaattggagcatctggtggacatg
acgaaggtgaatatggaagtaattaagccttgggtcaccagaagggtgaccgagcttctt
ggtttcgaggatgaagtgcttattaacttcatacacagtcttctggatgttaaggaggtg
aacgggaaggaagttcaaatacaaattactggatttatggaaaaaaacactggaaagttc
atgaaagaactttggacacttcttctcagtgcacagaaaaatgccagtggtgttcctcag
cagttcttggatgccaaggaggaagaacttttgaagaagaaggctgaaaatgatcggata
accagtgaaattcagaggaaaaaggataaggaaggtagagaaattatggaagagaggttt
aagaaaatggacggtggatttgattccaaggataatgatagtgcatcagctccaaattca
aagtcgaaggattcaggatttgaccgggatgggaaggaacctgacaagaggaatggtgtc
agggcaaggagcaggctttctaggtccccacattcacctgcagtttctacttcacctcat
cgaggctcaccctcaaggtcaatgagcaaatcattttcaaattcccgaagttattcaggt
ggtaggcacaggtcaaagagtatatctagatctcctgtagctcgaggacgctctctttca
tctgaaaagattcaccattctccacgaagacgatctatttctcctcacaggcattcacca
cgacgttctcctcataggaggccactttatttgaggagaagatccatatctcgctcaagt
tatagatctccttctcctatacgacgtagaatgcattctccagtccgtagaagttcacct
tttcgacgacggaggtcaccttctcccgcgcgacgacaaagatcaccttctcctatgcga
cgacaaagatcaccttctcccgtgcgacgacgaagatcaccttctcccatgcggagacga
agatcaccttctcccatgcgacgacgttggtcaccttcaccagtgcgacgacgcagatct
ccttctcctatgagaagacatagatctcctctggtgcgacgacgcagatcaccgtctctt
ggtcttcgtcatagatcaccttccccagggcacagacatagatccccatctccacttgga
ctacgaagatcaccaggccataggcatagatcaccatcacctcttggactacggagatca
ccttcacctaggcgacgaaggtctcctatcattcagcataggtcaccttctccagtgcgt
cgaattccaccaactagtgcacgaaatagattagaatctcccatgcaatcttcctctccc
atacgaagaaggtatggtagtagaactcctccacactctccatccccattgcgacatagg
tcacctgtacctagcaagaatagatctcccagtatctctccccagaggtctcctcgagat
gaatggagttctcagtctccaatacgacatgtatcaatctccccaaataggaaaaattct
caaagacaacaaagaagtcccttgcagtcttctataaggagagtcaggaacatatctagt
cctgtggggtctgtacgaagaggcaaaacttcaaactataaatcacaagagtcaatgtcc
actcctgagaactctccaaatcgttctgtatctgaagaagcaaggagtgagaccagcagt
gaaggtagaagtcctcatgggagccctatgaaacaaagagaaaagttagccagtaaaaga
agcttgagtcctgtaaagaaacaaagaacccagaaacctagccatgaaagcccaaagact
agagatgaagcagaagaagcgtactattccagagaaaggagagatcctaaaatgaactca
tcacaaaagatattaaaacactccccagctagtaagagaaaaggttcacctgcaaaatat
ggtcatgaggatgagttctctcctgaaagggttgctggtcatccagcttctgaacaaaac
aatgattggagtaagaaaggccgggagataaaacgggataagtcttctggaaaaggcaat
gaatttccttctcaacaaaagccatcagtgaacaaggaaactttttccagggagaagact
cgtgaatcttatgctgtagatattaaaaagtcagatgacaatgaccaatcccgttcaaac
aatgcaaaaagtagtgatcgtcaccacaaatccgaagccactccagatttagtcggaaga
gatgatcgtgtcaatcagagtgcatcacatgattctatttctgaggaaagtggtaaacat
agacgagagggaaaggacaggagaaagcataaaaggtctgagaaaagatatgcgtcttct
gatgaggattatagttatgattctgatatagaggacaggaaagaggctaagaagaggaga
aaggaggagaagaagttgcggaaggaggataagcgtaaaagacgggaagagaggcgtcgc
agaagggaggaacggcgtgcagagaagctgaagctgaagagtaaaacaaacaatagttca
gacgatgaggaagctgaacgagattatcatcaaagtgacggtgaagagacaccaactgag
caaaagaagcttgagattgaattacggaacaaggctcttgaatccctcaaagcaaagagg
ggcatgaataattaa

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