Patella vulgata (common limpet): 126815027
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Entry
126815027 CDS
T09576
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126815027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126815027
03036 Chromosome and associated proteins [BR:
pvul03036
]
126815027
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126815027
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126815027
PBAF complex
126815027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF596
Motif
Other DBs
NCBI-GeneID:
126815027
NCBI-ProteinID:
XP_055955372
EnsemblRapid:
ENSPVUG00005003829
LinkDB
All DBs
Position
3:complement(10833113..10847526)
Genome browser
AA seq
460 aa
AA seq
DB search
MALPSFRNIASSPQIGSKARCSVPSETKGSSPFVQSSHGHPNFHPVKMGSRRDRDSGIPK
PPKPPDKPLMPYMRYSRKVWEGVKAANPDLKLWEIGKIIGGMWRDLSEIDKQEFIEEYES
EKSQYNEAMKAYHNSPAYQAWVSAKSKAAAEAAIEEEERTSERSAERQRNSAKSKLEMPR
ISIQPAEDEDETDDGFSVKHIAHCRYTRNHRLINDIFSESVVPDVRTVVTTGRMSVLKRQ
VQSLTMHQKKLEAELQTIEERHDAKKRKFMESSHQFHDDLKKLCDSKPQISEDMLNGMVT
KAKEDIKNRQTQMAQQQEEERKKVDEKSKKEEDGQKDGDNKSNEDERIEEIPMETDQNVG
QIHAADKVESVEPDSSMPSLKELHEESMPAPDTTTDIPSEQSMNNDDKTESRVHSSTEEN
EEVDASKKHEQKETLVKEATSSSDSDTKQAETNSGGNEKS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccaagttttagaaatattgcatcatcgccacagatcggcagtaaagccagg
tgttctgttccatcggaaacaaaggggagtagtccatttgtacagtctagtcatggtcat
cccaacttccatcccgttaaaatgggttctagacgagatcgagatagtggtattcctaaa
ccaccaaaaccaccggacaagccactcatgccatacatgaggtatagtcgcaaggtttgg
gaaggagtgaaagctgcaaatcctgatcttaaactatgggaaataggaaaaataatcggt
gggatgtggagagatttatctgaaattgataaacaagaatttattgaagaatatgaatcg
gaaaaatcgcagtataatgaagccatgaaggcttaccataattctcccgcttatcaagct
tgggtctccgctaagagtaaagctgcggcagaagcagccatcgaagaagaggaaaggacg
tctgaaagatctgctgaaagacaaagaaactcggctaagtcgaaattggaaatgcctaga
attagtatacagcctgctgaagatgaggatgaaactgatgacggattttctgtaaaacac
atagctcattgtcgttacactagaaatcatcgtttgataaatgatatatttagtgaaagt
gttgtgccagatgtgcgtactgtcgtaacgacaggtagaatgagcgtattaaaaagacag
gtacaatcactgacaatgcatcagaaaaaattggaagcagaacttcagactatcgaggag
cgccatgatgcaaagaagcgaaagtttatggaatcaagtcaccagtttcatgacgattta
aagaagctgtgtgatagtaaacctcagataagtgaagatatgttgaatggtatggtaact
aaggctaaagaagacattaaaaatagacagactcaaatggcgcaacaacaagaggaagaa
agaaaaaaagtagacgagaaaagcaaaaaagaagaggacggacaaaaggatggagataat
aaatctaatgaagatgaacgaatagaagaaattcccatggaaactgaccaaaatgttgga
caaattcatgcagcagataaagtagaaagcgtagaaccagattccagtatgccgtcttta
aaggaacttcatgaagaaagtatgccggcaccagatacaaccactgatattccttctgaa
caaagtatgaataatgatgataaaacagaaagtagagtacacagttcaacagaagaaaac
gaggaagtggatgcttctaaaaaacatgaacaaaaagagacccttgttaaagaagcgaca
tcatcaagtgacagcgacactaaacaagcagaaacaaacagtggaggaaatgaaaaaagc
tga
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