Patella vulgata (common limpet): 126818134
Help
Entry
126818134 CDS
T09576
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03013
Nucleocytoplasmic transport
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126818134
09122 Translation
03013 Nucleocytoplasmic transport
126818134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126818134
03041 Spliceosome [BR:
pvul03041
]
126818134
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126818134
Spliceosome [BR:
pvul03041
]
Complex C
Other components
EJC/TREX
126818134
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126818134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
RPN2_N
Motif
Other DBs
NCBI-GeneID:
126818134
NCBI-ProteinID:
XP_055956508
EnsemblRapid:
ENSPVUG00005019910
LinkDB
All DBs
Position
4:complement(84370411..84393544)
Genome browser
AA seq
667 aa
AA seq
DB search
MSASMVLDFERTRTKFLNVIENSVKSGNIQECVTKIQEEDGGEGEKKLVTDQSLRDVIRK
LVDSDAPCETFKLVIGCAVEGAIKDICTTTVPFLMLADMFDMLTLEKSERVFSIVEDNVS
VWKSASFYDAGKNFLLRMCNDLIRRLSKSQNTVFCGRIQLFLSRLFPLSERSALNLMSQF
NSENVTVFNMQANESKFKKPSEIKVEKMEMEEGEMEEPPSTFPIDYNLYRRFWSLQEYFR
KPTQCYDKVSWKTFSIHADEVLKAFDSCKLDDLKSQRKKLDKTKQMDTQTFFAKYLTSEK
LLDLQLSDSNFRRYVLVQFLILFQYLNAQVKFKSASHVLTDEQSAWVKTATEKVTNLIKE
TPPDGEKFAESVEHILEREENWNNWKNEGCVSYVREKLTDDKEPVEKTRVRAKRKRVGDD
LMTSAGKINMGSSELTRLWNINSDNMDACKADTRVFLPHLEEYFAEAIEQADPEAQIEDT
YKLVNKDSYQWRSLRLLARRSPHFFTQLNPPGIPLNKYLDIMVNKIAQDMPSNSGEGEMD
GEGEEDEKNELDEEEPEEKIPRRHQITDNSKTINTVKDDAPLTDIVTKENIAKIAGLIGE
NWKMLGKELRMQEDDLAYFESEGETAPLNMLTVWKENETRDSKLDVIKSALIKIGQSSIA
DSVFTSS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtccatggtgcttgattttgaacgtactcggaccaagtttttgaatgtcatt
gagaatagtgtgaaaagtggaaacatacaggaatgtgttacaaaaatacaagaagaagat
gggggagagggagaaaagaaactcgtcacagatcaatcacttagagatgtcatcaggaaa
ttggtggattctgatgcaccatgtgaaacatttaaactggttattggatgtgctgtggaa
ggcgctataaaagatatatgtacaaccacagtaccgtttttaatgttagcggacatgttt
gatatgttaacgctagagaaatcagaaagagtatttagtattgttgaagataatgtttct
gtctggaaatcagccagtttttatgatgcaggaaaaaactttctcctgagaatgtgcaat
gatttgattcgtcgtctgtcgaaatctcagaatactgtattctgtggaagaattcaactg
tttctctcacggttatttcccctgtcggaaagatcagccttaaatcttatgagtcagttt
aattcagaaaatgtaaccgtgttcaatatgcaggccaatgagagtaaatttaaaaaaccg
agcgaaattaaggttgaaaaaatggaaatggaagaaggagaaatggaagaaccacccagc
acatttcccatagattataatctatatcgaagattctggtcgttacaagaatatttccgt
aaacctacgcagtgttatgacaaggtctcgtggaaaacattctccattcatgccgatgaa
gtattgaaagctttcgatagttgtaaactggacgatctaaaatcacaacgtaaaaaatta
gataagacaaaacaaatggatacacagacgttttttgctaaatatctcaccagcgaaaag
ttattagaccttcaactaagtgacagcaactttcgacgatatgttttagtccagtttctc
atcctctttcaatatctcaacgcacaagttaaattcaagagtgcaagtcatgttctaaca
gatgaacaatcagcttgggtaaaaacagcaacggaaaaagtcacaaatttgattaaagaa
acaccacctgatggtgaaaagtttgctgaatcagtggagcatattttagaaagagaagaa
aattggaataattggaagaacgaaggctgtgttagttatgtgagagagaaactaacagat
gataaagaacccgttgaaaagacacgtgtcagagcaaaacgtaaacgagttggtgatgat
ttaatgacaagtgctgggaagattaatatgggaagttccgagttaaccaggttatggaac
atcaattctgataatatggatgcttgtaaagctgatacaagagtatttttaccacatcta
gaagaatattttgctgaagctatagaacaagctgatcctgaagcccagatagaagatact
tataaattagtgaataaagatagttaccaatggcggtcattacgattattggctagacgt
tctccacatttcttcacacagctgaatccaccaggaattccactcaataaatatctcgat
atcatggtcaataaaatagcacaggatatgccttcgaactccggtgaaggtgagatggac
ggagaaggagaagaagatgagaagaatgaattagatgaagaggaaccagaagaaaaaata
cccagaagacatcaaatcaccgacaatagtaaaactattaacacagtaaaagacgatgca
ccattaacagatatagttaccaaggagaatattgctaagattgctggtttaattggtgag
aactggaagatgttgggtaaagaattacgaatgcaggaggatgatttggcttattttgaa
tcagaaggtgaaacagctccacttaatatgttaacagtatggaaggaaaatgagacccgg
gattcaaaacttgatgtgataaaatcggccctcatcaagattggacaatcatcaattgca
gacagcgtttttacttcatcttaa
DBGET
integrated database retrieval system
