Plasmodium vinckei vinckei: PVVCY_0200270
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Entry
PVVCY_0200270 CDS
T08061
Name
(RefSeq) transcription initiation factor TFIIB, putative
KO
K03124
transcription initiation factor TFIIB
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVVCY_0200270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvv03021
]
PVVCY_0200270
Transcription machinery [BR:
pvv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PVVCY_0200270
Prokaryotic type
Archaeal type
TFB
PVVCY_0200270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
zf-C2HC5
DUF919
ArfGap
Motif
Other DBs
NCBI-GeneID:
19962756
NCBI-ProteinID:
XP_008626410
UniProt:
A0A081IAL1
LinkDB
All DBs
Position
PVVCY_02:complement(join(90781..91353,91464..91918,92054..92123))
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AA seq
365 aa
AA seq
DB search
MSSFYNKNLSLSPSNGKAYPARIYGNNEAGNINRRLFRSFRSTKNDMCPDCKEKGIIICD
TSEGTQICNGCGLVVESNILSEEQEWRNFSNDGQSKGNDRNRVGEVSDIWLENNLTSTTF
IKSSKKLQHLNMMTQINKNDQTLLSAFNILKLICETFFLRSNVIERAKEITKELQEMEQL
KNRINNLNMLAVVYLACREAGHIKSIKELITFDRSYKEKDLGKTINKLKKVLPSRAFVYN
ENISHLIYSLSNRLQLSTDLIEAIEYVVKKATTLITTSHRLNSLCGGSIHLIVELNTSEE
KNVKLPHLSQIASVCGVTTNTLKTTFKELLAASEYILPKNYLKDNNTKLVILKHKYLHDD
KKKRR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttataataagaatttgtctttaagtccttcaaatggcaaagcttatcca
gcaagaatatatggaaataatgaagctggaaatataaatcgaaggctgtttcgttccttt
cgaagtaccaaaaatgatatgtgtcccgattgtaaagaaaagggaataataatatgtgat
acaagtgaaggaacacaaatatgtaatggttgtggtctggttgtcgaaagtaatatatta
tctgaagaacaagaatggagaaactttagtaatgatggtcaatcaaaaggcaatgataga
aatcgtgttggtgaagttagtgatatatggttagagaataatttaactagtactactttt
attaaatcgagtaaaaaattacaacaccttaatatgatgacacaaataaataagaatgat
caaacattattatctgcttttaatattttaaaattaatttgtgaaacattttttttgagg
agcaatgtgattgagcgtgctaaagagataacaaaggaattacaggaaatggagcagtta
aaaaatcgaataaacaacctgaacatgctagccgttgtttatcttgcttgtagagaagca
ggacatataaaaagtattaaggagttgattacatttgatagatcttataaagaaaaagat
ttaggaaaaacaataaataaattaaaaaaagtattaccatctcgagcatttgtatataat
gagaatatatcccatttaatttattctttatcaaataggttgcaattatctactgatttg
atagaggctatagaatatgtagtaaaaaaagcaacaacgttgattactacatctcataga
ttaaattcgttatgtggtggttcgattcatttaattgttgagttaaatacaagtgaagaa
aagaatgtaaaattaccacatctatcacaaattgcatctgtttgtggtgtaacaacaaat
actcttaaaacaacttttaaagaattgctagctgcatctgaatacattttaccaaaaaat
tatttgaaggataataatacaaagcttgtcatactaaaacataaatatttacatgatgat
aaaaaaaagaggcgatga
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