Plasmodium vinckei vinckei: PVVCY_1100920
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Entry
PVVCY_1100920 CDS
T08061
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1100920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1100920
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1100920
Spliceosome [BR:
pvv03041
]
Complex A
U2 snRNP components
U2 related factors
PVVCY_1100920
Complex B
PVVCY_1100920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
19960834
NCBI-ProteinID:
XP_008624504
UniProt:
A0A449BUY3
LinkDB
All DBs
Position
PVVCY_11:313327..317253
Genome browser
AA seq
1308 aa
AA seq
DB search
MSSDSDDYYYKINNDNNSSRKKRKEIDEDRVKKSKRHYDETDSRKDNDYSKEKHREKIKD
YEKEIYNRHKKNKYNDYEERERKNYYDRRSIESYKSNHSKSYEKKKYYEKDKYESKKSER
EKKRHKKDDDESDEYEELKYNKRKNDEKIKKKEKKNHHYTSSSDESYRKKEKHRDKKRSH
GRNRSNVMDNDTDRDSESKPSNKDKEKVSEQEVKNEIKNEIKSGFKIVDTTKPITEPKNL
SRLERLKLFAQKLKWGNNENVKKVTKFTLNASKPKGVNKHVNLDIFMENDIEEEEEDDDK
KKTNLVDAYIEREAEIEEDMLKEEGEENGDDPLEIFMKNIEKENLENQEIYVNKTITLDE
IYSYDMNKHKYEDVICAPVGNDEKNDKITNGNSQINKPELENDKGGNEGDDEMENETNEK
EDDDFYKMFIETLKKKTEEDKKKKEEEEEKERIKDEEKEQNELDDSSINLSEDSEYNCET
NTLKKKINKKLLQVNHDEIDYLPIKKNVYVQVSEITNMTDKDVEMFRKNNGNIVVRGKNC
PRPIQYFYQCGLPGKILNILEKKNFKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYL
FPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASVYCKAVDLKILAVYGGSNIGA
QLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSIL
NNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVGEKGKTNNNIYQFVEVLEEQKKLF
RLLKLLGEWIKYGLILIFVNKQLEADLLYLELFKYEYKTLVLHGGQDQSDREHTLKSFKD
EENKILIATSVMARGIDIKNIILVINYECPDHIEDYIHKIGRTGRSNNIGYAYTFITPTE
HTKAYDIYNLIKNNIYYINKTIDIPIELEQMVNEYVSSKIAAKGGNQLNPSNGALNSGTT
NSIAYHGWDKKKGYKGKGFKFTPNEKSRMQMDKDLAKKELGLVEEKNEDEDREVGYTSDM
ENEGKINSNTINKTENVGQPHEGKKMKNIPGTGKTQKNNETNISPQANLKQIELEIQKIK
MDDTMNLSLKAKKINELMKAHNFIELQQNSYKTVDSKNDEEIDKMAEMESLKLTEHIKDP
KEKQLMFQKTKEDIKKKLINNKAQMELRNESIQRNMLLNAIRTKNMKKYSPFLPHTYVTE
DNTILEEFYINDYPQHVRLKISNRDVLARIQDMSGAMCQIKGQYSNPSQPNKTNFILDHK
LLHIEITAPTYNQVQIARTELTSLLNMFMQKCNIKNQKPSAGGYTTFR
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgattctgatgactattattataagataaacaatgataataatagtagtaga
aaaaaaagaaaagaaatcgacgaagatcgagtaaaaaaaagtaagaggcactatgatgaa
acagatagtagaaaggacaatgattatagtaaggaaaaacatagagagaaaataaaagat
tacgaaaaagaaatatataaccgtcataaaaaaaataaatataatgattatgaagaaaga
gaacgaaaaaattattatgatagacgaagtattgaatcatacaaaagtaaccattcaaaa
agttatgaaaaaaaaaaatattatgaaaaagacaaatatgaatcaaaaaaaagtgaaagg
gaaaaaaaacgtcataaaaaagatgacgatgaaagtgatgaatatgaagaactgaaatat
aataaaagaaaaaatgacgaaaaaattaaaaaaaaagaaaaaaaaaatcatcattataca
tctagtagtgatgaaagttatagaaaaaaagaaaaacatcgtgataaaaaaaggagtcat
ggaaggaaccgaagtaatgtaatggataatgacaccgatcgagatagtgaaagtaagcct
tcaaataaagacaaggaaaaagttagtgaacaagaagtaaagaatgaaataaagaacgag
ataaagagcggatttaaaatcgtagatacaacaaaaccaataaccgagcctaaaaatctc
agccgattagaaaggctaaaattatttgcccaaaaactaaaatggggaaacaatgaaaat
gtcaaaaaggtaacaaaatttacacttaatgcttcaaaaccaaaaggagtaaataaacac
gtcaacttagatatattcatggagaatgatatcgaagaagaagaagaagatgatgataaa
aaaaaaaccaacttagtagatgcatatattgaaagagaagccgaaatagaagaagacatg
ttgaaggaagagggagaagaaaatggggatgatccattggaaatatttatgaaaaatata
gaaaaagaaaatttagaaaatcaagaaatatatgtaaataaaacaataactcttgatgaa
atttatagctatgatatgaacaaacacaaatatgaagatgtaatttgtgccccagttggg
aatgacgaaaaaaatgacaaaataacgaatggcaattctcaaattaataaacccgaatta
gagaatgataaaggagggaacgaaggggatgatgaaatggaaaatgaaacgaatgaaaag
gaggacgatgatttttacaaaatgtttattgaaacacttaagaaaaaaacagaagaagat
aaaaaaaagaaggaagaagaagaagaaaaggaaagaataaaagacgaagaaaaagaacaa
aacgaattagatgattcttctataaatttaagtgaagatagtgaatataattgtgaaaca
aatactttaaaaaaaaaaattaataaaaaattattacaagtaaatcatgatgaaattgat
tatttacctattaaaaaaaatgtttatgtacaagttagtgaaattacaaatatgacagat
aaggatgttgaaatgtttcgaaaaaataatggaaatatagttgtaagaggaaaaaattgt
cctcgacctattcaatatttttatcaatgtggtttacctgggaaaattttaaatatatta
gaaaaaaagaattttaaaaaaatgtttagtatacaaatgcaagcaataccagcattaatg
tgtggtcgtgatataattgcaatagcagaaacaggaagtggaaaaactatatcttattta
tttcctttaattaggcatgtattacatcaagacaaattaagaaacaatgatggtcccatt
gggattatacttactcctactagagaattaagtattcaagttaaaaatgaggcaagtgta
tattgtaaggctgttgatttaaaaatattagcagtttatggtggatctaatattggtgca
caattaaatgtattaaaaaaaggtgtcgagataattgtcggaactcctggaagaataatt
gatatattaacaataagtaatagtaaagttacaaatttgaatagagcatcttttatagtt
ttagatgaagcagatagattgttagatcttggatttgaatcacaaattcatagtatttta
aataactgtagaaaagataaacaaactgctatgatatctgcaacatttcctaattatatt
caaaacttagcaaaaaaattattatataaacctatagaaataatagtaggagaaaaagga
aaaacaaataataatatatatcaatttgttgaagttttagaagaacaaaaaaaattattt
cgtttattgaaattgttaggagaatggattaaatatggccttattttaatatttgttaat
aaacaattagaagctgatttattatatttagaattatttaaatatgaatataaaacatta
gtgttgcatggtggacaagatcaatccgatagagaacatacattaaaaagtttcaaagat
gaggaaaataaaatattaattgcaacatctgttatggctagaggaattgatattaaaaat
attattttagtaattaattatgaatgcccagatcatattgaagattatatacataaaatt
ggaagaactggtagatcgaataatataggatatgcctatacgttcattactccaactgaa
catacaaaagcttatgatatttataatttaattaaaaataatatatattatataaacaaa
acaatagatattcctattgaattagaacaaatggttaatgaatatgtgagtagtaaaata
gcagcaaagggtggaaatcaacttaatccatctaatggtgctttaaattctggtactact
aattcgatagcttatcatggatgggataagaaaaaaggatataaaggaaaaggatttaaa
tttacaccaaatgaaaaatcaagaatgcagatggataaagatttagcaaaaaaagaactt
ggattagtagaagaaaaaaatgaagatgaggatagagaagtaggatatacatctgatatg
gaaaatgaaggaaaaataaattcgaatacaattaataaaacagagaatgttggtcaaccc
catgaaggaaagaaaatgaaaaatataccaggaacaggtaaaacacaaaaaaataatgaa
acaaatatatcaccacaagcaaatcttaaacaaattgaattagaaattcaaaaaataaaa
atggatgatactatgaatttatcattaaaagcaaaaaaaataaatgaactaatgaaagct
cataattttattgagttacaacaaaatagttataaaacagtggatagcaaaaatgatgaa
gaaattgataaaatggcagaaatggaaagtttaaaattaacagaacatatcaaagatcca
aaagaaaaacaattaatgttccaaaaaacaaaagaagatattaaaaaaaaactaataaat
aataaagctcaaatggaattaagaaatgaaagtatacaaagaaatatgctattaaatgct
ataagaacaaaaaatatgaaaaaatattctccatttttacctcatacatatgtaactgaa
gataatactattttagaagaattttatattaatgattatcctcaacatgtgcgtttaaaa
atttctaatcgagatgtcttagcacggatacaggatatgtctggagctatgtgtcaaatt
aaaggacaatactctaacccttcacaaccaaataaaacaaactttatattagatcataaa
ttgttgcatattgaaattactgcccctacttataatcaagtacaaattgctcgaacagaa
ttaacttctcttcttaacatgttcatgcaaaaatgtaacataaaaaatcaaaaaccaagt
gcagggggatacaccacatttcggtga
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