Plasmodium vinckei vinckei: PVVCY_1303960
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Entry
PVVCY_1303960 CDS
T08061
Name
(RefSeq) splicing factor 1, putative
KO
K13091
RNA-binding protein 23/39
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1303960
Spliceosome [BR:
pvv03041
]
Common components
Common spliceosomal components
General mRNP proteins
PVVCY_1303960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
19958587
NCBI-ProteinID:
XP_008622291
UniProt:
A0A449BYR9
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All DBs
Position
PVVCY_13:join(1469727..1471448,1471545..1471919)
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AA seq
698 aa
AA seq
DB search
MEEDNEQFDEEETIGKKKNKKKVNGKVKSQVNDKNESDENNSNTDDESLLKNDKRKKKSA
REKASKSKVTRRGRRKREDTEPDEEEEEEEEETDKVEKDENSNSSENEETQKSKNKDELD
ENDSNHSSRPSEQGDQEEEQSDNDDKEKRKKEKYKNSKHYSDERKSNSNGDKSSDSESEQ
DERRRSRKREEKSDSYKKDYHKKRRRKSNSSNDSDSSDDDEKRSHKSRSLKKRRHERRER
RRHRDRSRDRSRDRSRDRSRDRSRGRSRDRYRDRERERRRERERERMRREREREIEREKR
REERRKKEELEEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSK
GVAYVEFYTPESVIKALAANGYMLKNRPIKVQSSQAEKNRAAKASKHHPIDPNDIPLKLY
IGGLLGPLSNITEQELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTV
MNGMEVAGREIKVSYAQDSKYLLASDALKDLNIPNLNQIKAAAQGGRKSGNQEDEQDNEK
IDNDDDDGGGLITGASSKIALMQKLQRDTIIDASMPSGYATGSNTIARNSLSTIPNPLNN
VTPNIVLCNMFSPNDSNIGSDPDFFSDILEDVKGECSKYGNIIKIWLDTKNIDGKIYIKY
TKNDESLKAFQCLNGRYFGGSLINAYFITNAIWESTCS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagataatgaacaatttgatgaagaagaaactattggcaaaaagaaaaataaa
aaaaaagtaaatggaaaagtaaaatctcaagttaatgataaaaatgaaagtgatgaaaat
aattctaatacagatgatgaatctttattaaaaaatgataaaagaaaaaaaaaaagtgca
agagaaaaagcaagtaaaagtaaggtaacccgaaggggacggagaaaaagggaagataca
gaacccgatgaagaagaagaagaagaagaagaagaaactgataaagttgaaaaagatgaa
aacagtaatagtagtgaaaatgaggaaacacaaaaaagtaaaaataaagatgagttagat
gaaaatgatagtaatcattcttcgagaccttcagaacaaggtgaccaagaagaggaacaa
agtgataatgacgataaagaaaaaagaaaaaaagaaaaatataaaaattcaaaacattat
agtgatgaaaggaaaagcaactcaaatggagataaaagctctgattcagaaagtgaacaa
gatgaaagaagaagaagtagaaaaagggaagaaaaatcggacagttataaaaaagattat
cataaaaaaaggagaagaaaatcaaactcaagtaatgattccgattcaagtgatgatgat
gaaaaacggtcacataagtcaagaagtttaaaaaaaagaaggcacgagaggcgagaaagg
aggagacacagagatagaagtagagatagaagtagagaccgaagcagagacagaagtaga
gatcgaagcaggggcagaagcagggatagataccgcgatagggaacgtgagaggagacgt
gaaagggaaagagaaagaatgcgaagggagagagaaagagaaattgaaagagaaaaaaga
agagaagaaagacgtaaaaaagaagaattagaagaagcaaaaagagatgatttaacagta
ttagtattaaatttagatttaaaagcagatgaaagagatatatatgaatttttttcagaa
gttgcaggaaaagttcgtgatatacaatgtataaaagatcaaagatcaggaaaatcaaaa
ggtgtagcatatgtagaattttatacaccagaatctgttataaaagcattagcagctaat
ggctatatgctaaaaaatagaccaataaaagttcaatcatctcaagctgaaaaaaataga
gcagcaaaagctagtaaacatcacccaatagatcctaatgatattccattaaaattatat
ataggaggattattaggtcctttaagtaatataacagaacaagaattaaaacaattattt
aatccttttggagatatattagaagtagaaatacatagagacccatataccggtaaatca
aaaggttttgggttcattcaatttcataaagcttcagaagctattgaagctatgactgta
atgaatggaatggaagtagctggccgagaaataaaagttagttatgctcaagattcaaaa
tatttattagcaagtgatgcattaaaagatttaaacatcccaaatttaaatcaaataaaa
gcagcagctcaaggaggtagaaaatctggaaatcaagaagatgaacaagataatgaaaaa
attgacaatgatgatgatgatggaggtggattaataactggagccagtagcaaaatcgct
ttgatgcaaaaattgcaaagagatacaataattgatgcttcgatgccaagtggatatgcc
actggatcaaataccatagcaagaaactcattatctactataccaaaccctttaaataat
gtaacaccaaacattgttttatgtaatatgttttcaccaaatgatagtaatattggttcg
gatcccgatttttttagtgacatacttgaagatgtaaagggagaatgtagtaaatatggg
aatattattaaaatatggctagatactaaaaatatagatggtaagatttatattaaatat
actaaaaatgatgaatcattaaaagcttttcaatgcttaaatggcagatattttggagga
tcactcataaatgcatattttattacaaatgctatatgggaatccacatgttcttaa
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