KEGG   Plasmodium vinckei vinckei: PVVCY_1400430
Entry
PVVCY_1400430     CDS       T08061                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pvv  Plasmodium vinckei vinckei
Pathway
pvv03030  DNA replication
pvv03410  Base excision repair
pvv03420  Nucleotide excision repair
pvv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PVVCY_1400430
   03410 Base excision repair
    PVVCY_1400430
   03420 Nucleotide excision repair
    PVVCY_1400430
   03430 Mismatch repair
    PVVCY_1400430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvv03032]
    PVVCY_1400430
   03400 DNA repair and recombination proteins [BR:pvv03400]
    PVVCY_1400430
Enzymes [BR:pvv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PVVCY_1400430
    6.5.1.6  DNA ligase (ATP or NAD+)
     PVVCY_1400430
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PVVCY_1400430
DNA replication proteins [BR:pvv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PVVCY_1400430
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PVVCY_1400430
DNA repair and recombination proteins [BR:pvv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PVVCY_1400430
   NER (nucleotide excision repair)
    Other NER factors
     PVVCY_1400430
   MMR (mismatch excision repair)
    Other MMR factors
     PVVCY_1400430
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
Other DBs
NCBI-GeneID: 19959508
NCBI-ProteinID: XP_008623202
UniProt: A0A449BZI7
LinkDB
Position
PVVCY_14:complement(join(173584..176074,176207..176397))
AA seq 893 aa
MKLLLLVLLTKMYFCKIKRYMRTEYNYVTPFMKSKLFHNYKNKFNVIILKNIRNSVPNRN
DKYLKCLSFPKKMDGDEQCDIKAEETHAKNEEKEPSKRKNTNDDGTKTKKSKGKNENEIK
KGSLFNCKVYEDEKISDLASPKFNPANFDISNLCLPEKDKAKHKFKDSLLFTFLTNTFNQ
IEELKGSGAGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYQNVEAGVGEAL
ILKTMSEAYSRTEASIKKDLQQIEDLGIIAESCSCKMRTIFPLPRLTIQSVFNELKSIPT
ISGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQALAYAFVLTRPE
LPENIIKEGKMMNEKLLNESVAVKGDKDNAKEIKNENNIKLEEKNDADKKGIALDTDQFN
DLVKSIKMRNERMSKPNLFYNIGKEGDTRLLPIFKELKNAYCDVNNDSDIFECMEKSVKS
ALCELPNIEMIIQNLLNGDDMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFNNVTFT
CEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIIDSEVVA
YDIENKKILPFQILTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYS
LLKCKEGVLEYATHSEMNNIEDIDIFLQDAIENSCEGLMVKTLLDNASYEPSRRSLNWLK
VKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVCKAGTGFSDEI
LNALHESLSDKIIPNKKSYYEVSDKLNPDVWFDAQYVWEIKAADLSLSPVHTAAIGVYSD
DKGIGLRFPRFLRLRDDKNPEQATTTQQIVEFYEAQFASSKNKNNYNDDSGSE
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgaaactattattactggtacttttaacaaaaatgtatttttgtaaaataaaaagatac
atgagaactgaatataattatgtaacaccatttatgaaaagcaaattatttcacaattat
aaaaataagtttaatgtgataattttaaagaatattagaaatagcgtgccaaatagaaat
gataaatatttaaaatgtttatcctttcctaaaaaaatggatggggacgagcaatgtgat
atcaaagcagaagagactcatgctaaaaatgaagaaaaggaaccatcaaaaaggaagaat
acaaacgatgatggtacaaaaacaaagaaatcaaaaggaaagaatgaaaatgaaataaaa
aagggttcattatttaactgtaaagtttatgaggatgaaaaaataagtgatttagcatca
cccaaatttaatcctgctaattttgatataagtaatttatgcttacctgaaaaggataaa
gcaaaacacaagtttaaagattccttattatttacatttcttacaaatacatttaatcaa
attgaagaattaaaaggtagtggggcaggaagcaagaaaaatgtagctatcattttgtcg
aacgtttttcgtgttttaatatattatagccctaatgatttaattccggcagtatatata
actttaaataaagtggcaccagattaccaaaatgttgaagcaggtgttggtgaggcatta
atattaaaaacaatgtcagaagcatatagtagaactgaagctagtataaaaaaagattta
cagcaaattgaggatttaggaataatagcagaaagttgctcatgtaaaatgagaactata
tttcctttacctaggttaactattcaatcagtttttaatgaattaaaaagtataccaact
attagtggctctaattctcaacagaaaaaaagagaagtaataaaaaagttattagttagt
gcaaaaacttcagaggcaaaatatatagtgcgatttttacaacaacgtttaagaattggt
gtaaatagtgctactgttttgcaagctttggcatatgcttttgtattaacgcgccctgaa
ctcccagaaaatatcataaaagaggggaaaatgatgaatgaaaaattgctaaatgagtca
gtagcggttaaaggtgacaaagataatgccaaagaaataaaaaatgaaaataatataaag
ctggaagagaaaaatgatgcagataaaaaaggaattgcattagacactgatcaatttaat
gatttagtaaaatcaataaaaatgcgtaatgaaagaatgagtaaacccaacttgttttat
aacataggaaaagaaggagatactcgtttattacctatatttaaagaattaaaaaatgca
tattgtgatgtaaataatgattcagatatttttgaatgtatggaaaaatctgtaaaaagt
gctttatgtgaattaccaaacattgaaatgattatacaaaatttattaaatggtgatgat
atgaatgtgctaatgaaaaaatgtactgttaaaaccggagttccagtgcaacctatgtta
gctaagccaacaaaaggaatacaagaagttttagatagatttaataatgttacatttaca
tgtgaatacaaatatgacggtgaaagagcccaaattcactatattgataaagataatata
aagatttttagtagaaatttagaaacaatgacagagaaataccctgatgttattcaaatt
gtaaaagatcaaataatgcctggtgttactgaatctattattgatagtgaagttgtagca
tatgatattgagaataagaaaatattaccgtttcaaatattaacaacaagaaaaagaaag
gatgtagatatagaaaacataaaagtgaaaatatgtttgtttccatttgatttaatatgt
tgcaatggggtacctgtaataaaagaaccattagaaattcgaaggaagttattatattct
ttattaaaatgtaaagaaggagtattagaatatgcaacacattcagaaatgaataatatt
gaagatatagatatatttttacaagatgctattgaaaatagttgtgaaggattaatggtt
aaaactttactcgacaatgcttcttatgaaccatcaagacgatcattaaactggttaaag
gtaaaaaaagattacatagaaggattatcagattcagttgatttagtgcctatagctgga
tattatggaaaaggaaaaagaagtggggtttatggtgcttttgttttagctgcatataat
tctgaaacagaaaatttccagacagtatgtaaagcaggtaccggttttagtgatgaaatt
cttaatgcattacatgaatctttaagtgataaaattatacctaataaaaaatcatattat
gaagtttcagataaactaaaccctgatgtgtggtttgatgctcaatatgtatgggaaatt
aaagcagcagacttgtctttatcgcctgtccatactgcagctatcggagtatattcagat
gataaagggattgggttaagattcccaaggtttcttagattgagagatgataaaaatcca
gaacaagcaacaacaactcagcagattgtcgaattttacgaagctcaatttgcttcgagc
aaaaataaaaataattataatgacgatagtggaagtgaatag

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