Plasmodium vinckei vinckei: PVVCY_1404400
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Entry
PVVCY_1404400 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1404400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1404400
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_1404400
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1404400
Spliceosome [BR:
pvv03041
]
Complex A
U1 snRNP components
U1 related factors
PVVCY_1404400
Complex B
PVVCY_1404400
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
Pre-60S particles
Helicases
PVVCY_1404400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ANM3_C2H2_Zf
Motif
Other DBs
NCBI-GeneID:
19959116
NCBI-ProteinID:
XP_008622814
UniProt:
A0A449C0F4
LinkDB
All DBs
Position
PVVCY_14:complement(1556466..1558559)
Genome browser
AA seq
697 aa
AA seq
DB search
MKNILKFRPINCRTGDKLCLLKKLVHTKNGLSQIHCKNNKIGNGIISHQELKIGYIKLIN
NIRNQNICTENKVKDDNNLANHSNETINNTDTKLNYNIDNDFDREDNDIKYNGNQNSNLS
DTNFEGNEFENYNKFNRYERKNNKEDGENGFINSRNERTNYQKKNNYNLKNDYDNNTDNN
MDDYNNSYTKRDDHNNSRYSRNLNNSDRYSKLGDNLKDIEWNKIKVKIERQNLFNVNENK
LKKLSNEEIQNELKNNNIYVNKDLALNSFITQFSDLDFHESILNYLNENFKEPTAIQKIT
WPIALSGKDLIGVAETGSGKTLAFVLPCLMHILKHKQTEMEQNGGEHIKNKEEKLSESNN
NDNSYDPDIEKEFQNEDNEDRKTYGLILLPTRELCMQVLNEIKKFENELDLKAVAVYGGV
PKYFQINSIKKGADIIVATPGRLLDYLENGIINLLRCIYVVIDEADRLLDMGFEKQLRKI
MTQINKNKQLLFLTATWPEQVRKLAYDFCSFDPVKIQIGKSELTANKNIEQQVIVSSSID
LKKKLLDWLKDNYENNKILIFCDTKRNCDNLCKELRYHQYNSLSIHGDKQQRERDRILNN
YKNDRCNILVATDVASRGLDIKNISIVINYDIPNTIEDYIHRIGRTGRAGNKGKSILFFP
YDYYVPQKQRFAKDLVKLLNKTNQQVPKELREIVSTR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatattaaaattcagaccaattaattgccgtacaggtgataaattatgtttg
ctaaaaaaattggtacacacaaaaaatgggttatcacaaattcattgtaaaaataataaa
atagggaatggtataattagccatcaagaattaaaaattggatatataaaattaataaat
aatataagaaatcaaaatatatgtactgaaaataaagtcaaagatgacaataatttagct
aaccattcaaatgaaacaataaataataccgatacaaaattaaattataatatagacaac
gattttgatagagaagataatgatataaaatataatggcaatcaaaactcgaatttgtct
gatacaaattttgaaggtaatgaatttgaaaattataacaaatttaataggtatgaaaga
aaaaataataaggaagatggtgaaaatggatttattaatagtagaaatgaaagaacaaat
tatcaaaaaaaaaataattataatttaaaaaatgattatgataataatacagataataac
atggatgattataataatagttatacaaaaagagacgatcataataattcgagatattcg
agaaatttaaacaattcagataggtactcaaaattaggagataatttaaaagatatagaa
tggaataaaataaaagtaaaaatagaaagacaaaacttatttaatgttaatgaaaataaa
ttaaaaaaattatcaaatgaagaaatacaaaatgagttaaaaaataataatatatatgta
aataaagatttagcattaaatagttttataacccaattttcagatttagactttcatgaa
tcaatattaaattatttaaatgaaaattttaaagaaccaacagctattcaaaaaattaca
tggcctattgctttgtcaggaaaagatttaataggtgttgctgaaacaggaagtggaaaa
acactagcatttgttttaccatgccttatgcatatattaaaacataaacaaacggaaatg
gaacaaaatggaggtgaacatatcaaaaataaggaagaaaaattatctgagagtaataat
aatgacaatagttacgatcctgatattgagaaagaatttcaaaatgaagataatgaagat
cgtaaaacatatggattaattttattaccaacacgagaattgtgtatgcaagtattaaat
gaaattaaaaaattcgagaatgaattagatttaaaagctgttgcagtatatggtggtgta
ccaaagtatttccaaattaatagtataaaaaaaggagctgatataattgttgcaacacca
ggaagacttcttgattatttagaaaatggaatcataaatttattaagatgtatctatgta
gttattgatgaagcagatagattacttgatatgggatttgaaaaacaattaagaaaaata
atgacacaaattaataaaaataaacaattactatttttaacggcaacatggcctgagcaa
gttagaaaacttgcatatgatttttgttcatttgatccagtaaaaattcaaattggaaaa
agtgaattaacagcaaataaaaatatagaacaacaagtaatagttagttcatcaattgat
ttaaaaaaaaaattattagattggttaaaagataattatgaaaataataaaattttaatc
ttttgtgatacaaaaagaaattgtgataatttatgtaaagaattacgataccatcaatat
aatagtttatcaatacatggagataaacaacaaagagaaagagatagaatattaaacaat
tataaaaatgatagatgtaatatactagtagcaactgatgtagcatcaagggggttagat
attaaaaatatttcgatagttattaattatgatataccaaatactattgaagattatatt
catagaattggacgaacaggtagagcaggcaataaagggaagtccatattatttttccct
tatgattattatgttccccaaaaacaaagatttgcaaaagacttagtaaaattattaaat
aaaacaaatcagcaagttcctaaagaactcagagaaattgtaagcacacgatga
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