Pistacia vera (pistachio): 116108604
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Entry
116108604 CDS
T07386
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116108604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvy02000
]
116108604
04147 Exosome [BR:
pvy04147
]
116108604
04090 CD molecules [BR:
pvy04090
]
116108604
Enzymes [BR:
pvy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116108604
Transporters [BR:
pvy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116108604
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116108604
CD molecules [BR:
pvy04090
]
Proteins
116108604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
AAA_29
AAA_21
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_24
Motif
Other DBs
NCBI-GeneID:
116108604
NCBI-ProteinID:
XP_031250706
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MSSSSEMREQEKGEIRGKESKNSIAIILRYADWTDILLMMLGTVGAIGDGMSTNCLLVFA
SSIMNSLGYGHTQNHDSFMDEVEKCSLYFVYLGLAVMVVAFMEGYCWSKTSERQVLKIRY
KYLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPMFLMHASVFISGLAFS
TYFSWRLSIVAFPTLLLLIIPGMIYGKYLLYLSKKAYKEYGIANSIVEQALSSIKTVYSF
TAERRIVDRYSDILDRTTKLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSRLVMYKGESG
GRIYAAGISFVLSGLSLGMALPEVKYFTEASVAATRIFNRIDRIPEIDGEDTKGLVLEQI
QGEIEFEHVKFTYPSRPDSIVLKDYSLKVEAGKTVALVGASGSGKSTAIALVQRFYDADD
GIVKIDGVDIRKLQLKWVRGKMGLVSQEHALFGTSIKENIMFGKLDATMDEIIASAMAAN
AHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESEKL
VQNALDQASMGRTTLVVAHKLSTVRNADLIAVVSNGCIVEIGSPSELINRTNGHYAKMAK
MQRQFSCDDQEPNPETHYSSAARSSGGRLSTSKSSPAVFASPLSVIDSPQPVTHAPPSFS
RLLSLNAPEWKQGLAGSLSAVAFGSVQPIYALTIGGMISAFFAKTHQEMQARIRTYSLIF
SSLTLISLVLNLVQHYNFAYMGERLTKRIRIRMLEKILTFEAAWFDEEQNSSGALCSRLS
NEASMVKSLVADRVSLLVQTTSAVTIAMILGLVVAWKLAIVMIAVQPLTILCFYTRKVLL
SSVSTNFVKAQNHSTQIAVEAVINHRIVTSYGSLGKVLQLFDEAQEEPRKEATKKSWLAG
IGMGSAQCLTFMSWALDFWYGGTLVEKGEISAGDVFKTFFILVSTGKVIADAGSMTSDIA
KGSTAIASVFNILDRQSLIPGSSHAGEGSSGSKLEKMAGKIEMKRVDFAYPNRPENLVLR
QFSLEVKPGTSVGLVGRSGCGKSTVIGLIQRFYDVERGSVKIDGVDVRELDVQWYRRYTA
VVSQEPVIYSGSIRDNIMFGKLDASENEVAEAARAAKAHEFISSLKDGYETECGERGVQL
SGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNT
IKKLDSIALVADGKVVERGTYAQLKHMRGAFFNLASLQS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttcttcagagatgagagagcaagagaaaggagagatcagaggaaaggagagt
aagaatagtatagcaataattttaagatatgctgattggacagatattttgttaatgatg
ttgggaactgttggagctattggagatggcatgtctacaaactgtttacttgtctttgcc
agcagcataatgaacagtttgggatatggtcatacccaaaatcatgatagtttcatggac
gaagttgaaaagtgcagcttatattttgtgtacttgggattagcagtcatggtggtggct
tttatggaaggttattgttggagcaaaaccagcgagcggcaggtgctgaagatccgctac
aagtatttggaagctgttctgagacaagaagtcggattttttgattcacaagaagcaaca
acttcggaaatcattaacagcatatcaaaagatacgtctctcatacaagaagttctcagt
gaaaaggtgcccatgtttcttatgcacgcttctgtgttcatctcaggacttgcattctcc
acatacttttcatggaggttgtctatagtagcctttccaacgctacttctcctgataatt
cctggaatgatttatggaaaataccttctttatctgtcgaagaaagcctacaaggagtat
ggcatagcaaatagcattgtagagcaggctctaagctcgattaagactgtgtattcattc
acggctgagaggagaatcgttgatagatattcagatatattggatagaacaacgaaactg
ggaattaaacaaggcatagcaaaaggtttggctgtggggagcacagggctttcttttgca
atatgggctttccttgcttggtatggaagtcgtttggtgatgtacaaaggagaaagcggc
ggaaggatctatgcagctggcatttccttcgtactgagtggactatcccttggaatggca
cttcctgaagtaaagtacttcacagaagcttcagttgcagcaacaagaatattcaacagg
atagacagaattcctgaaattgatggtgaagacacaaaaggacttgtattggaacaaatt
caaggagaaatagaatttgagcatgtaaaattcacctacccttctcgtcctgactcaatt
gtactgaaagattacagtctcaaagttgaagcaggcaaaactgtagctcttgttggggca
agtggaagtggaaaatcaactgcaattgcacttgtgcagcgcttttatgatgcagatgat
ggaattgtgaagattgacggtgtagatatcagaaaactgcagttgaaatgggttagaggg
aagatgggtctagttagtcaagaacatgcgttgtttgggacttcaataaaggaaaatatt
atgtttgggaagcttgatgccaccatggatgaaatcattgcttcagccatggctgcaaat
gctcataatttcataagacaacttccagaaggttatgaaacaaaggttggtgaacgtgga
gcacttttatcaggtggacaaaagcagcgaattgctattgctagagccatcattaagaac
cctgtgattctcctacttgatgaagcaacaagtgctcttgactctgaatcagaaaaattg
gtgcaaaatgcccttgatcaagcctctatgggaagaaccacactggtagtagcacacaag
ctttcaacagtgaggaatgcagatcttatagcagtcgtaagtaacggttgcatcgtcgaa
ataggctcacccagtgaactcatcaacagaacaaatggccactatgcaaaaatggcaaaa
atgcagagacaattcagctgtgacgaccaagaaccaaacccagaaacgcattactcatca
gcggcaagaagtagtggtggccggcttagtacatcaaaatcgagcccggctgtgtttgct
tcaccactatccgttattgatagcccacagccggtaactcacgcgccaccgtccttctct
aggcttctctctttaaatgcgcctgaatggaagcaaggtcttgctggaagcctctcagct
gtagcctttggctcagtgcagcctatttatgccctaaccatcggtggcatgatttcagct
ttcttcgcaaaaacccaccaggaaatgcaggctcgaattcgtacatattccttaattttc
tcttctcttaccttgatttctcttgttttgaatcttgtgcaacattacaattttgcttat
atgggtgaacggctaacgaagagaatcaggataagaatgcttgaaaagattctgacattc
gaagccgcttggtttgatgaagagcaaaattccagtggagctttgtgttcgagattgagt
aatgaggcttctatggtcaagtccctggttgcagacagagtatccttattggttcaaact
acttctgccgttaccattgcgatgattttggggttagttgtggcttggaaattagcaata
gttatgattgcggtccaacctctcacgattctgtgtttttatactcgaaaagtattgctc
tcaagcgtttcaaccaattttgtgaaggcacaaaatcacagtactcaaattgctgtggaa
gcagtgattaatcatagaattgtgacttcatacggaagtttgggaaaggttcttcaactt
tttgatgaggctcaagaggaacccagaaaggaggcaacgaaaaaatcatggcttgctgga
attggtatggggtctgctcaatgcctaactttcatgtcatgggctctggatttctggtat
ggtggtactttggtggaaaagggagagatttcagcaggggatgtgtttaagacatttttc
atattagtaagcactggaaaggttatagctgatgcaggaagcatgacttctgatatagcc
aagggctcaaccgcaattgcatccgtattcaacattcttgatcgccaatctctcattcca
ggctcttcacatgcaggggaagggtcaagtggaagcaagttagaaaaaatggcagggaag
atagagatgaaaagggttgattttgcatacccaaacaggccagagaaccttgtgttgcga
caattttccttggaggtgaaaccaggaacaagtgttggactcgtaggaagaagtgggtgt
ggaaaatcaaccgttattggattgattcaaagattttatgatgttgagagggggtcagtg
aaaatagatggggtagatgtaagggagctagacgttcaatggtatagaagatacacggcg
gttgtcagccaagagccagtgatatattcaggcagcattcgggataacatcatgtttggg
aagcttgatgcttcagaaaatgaggtggcggaagctgctagggctgcaaaagctcatgaa
ttcatttcatcactaaaagatgggtatgaaactgaatgcggtgaaagaggagttcaatta
tcaggagggcagaaacaaagaatagcaattgcaagagctataatcaggaacccaacaata
ctgctactagatgaggcaaccagtgctctggatgtgcaatctgagcaggttgtgcaagaa
gcgttggaccgaattatggtgggaaggacaacaattgtggtagctcatcgactcaacacc
ataaaaaagcttgattccattgccttggttgcagatgggaaggtagtggaacgaggaacc
tatgctcaactcaaacacatgcgcggtgccttctttaacctcgccagccttcaatcatag
DBGET
integrated database retrieval system
