Pistacia vera (pistachio): 116108610
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Entry
116108610 CDS
T07386
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116108610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116108610
03036 Chromosome and associated proteins [BR:
pvy03036
]
116108610
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116108610
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116108610
PBAF complex
116108610
GBAF(ncBAF) complex
116108610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116108610
NCBI-ProteinID:
XP_031250711
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MEEKRREAGSLPAATSSAGVGVESPASEPASSRRRAGGQKRKATALSAGNTSSTPSKRIT
RDKNSNSHTPIYNHNGPLTRARQGPSSLSASAGGTALAGGKLEGARDDLKLEVVEELNKE
SQQWEALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTRIHPLEEQGLPSFFNGKSQNRT
PDMYMEIRNWIMKKFHANPNIQIELKDLSELEVGCVDDKQEVLEFLDYWGLVNFHPFPPE
STATNADGDRVANADVDMAANIDDGGAAKKDSLLENLYHFDEIQLCPRVAPKPKVISPAA
PSGLFLESAIAEELVKPEGPGVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGS
GMSSSDFILMVPAEAAGLSGGKWTDQETLLLLEALELYRENWNEIAEHVATKTKAQCILH
FVQMPIEDVFFDHDDSVDAKSKETSDPTATNDDTSTPKDVPETSESKTGANEGQTQTSPM
ETSKSEDANATNICQETSKPEDENKVKVGEEMLKSEDTNEVKVPETGENIALKALREAFE
AVGYHPPESPHSFAEVGNPVMALVAFLSLLVGPDDATASTRGSLKSISGNSPAIQLAARH
CFVLEDPPGDKKEPTQSESVAKIADLDTQKDDYLEDRKNKEDNTTTMLDERDLPNDHDSK
ITEESVPEEKRTSPSSNDKPTEELNAVKETGNKVIPERVEPSDLNQLSNQELPKENQPSI
EEESNDLSSKVAPSSVKESGEGNSVGEPSSSVEVAKDVELSSDAHPSERSEAGQPAISNS
DVVPSQPSKATKDIDTVSNSLPREIIEPEQPVASSSKAEASQTLEAPKDVDMVSNSLPLE
SNEPQQTDSIIENGTTAGEDQTKDVKEEKHDHREAKDEHNIDKIKHAAVTALSAAAVKAK
LLANQEEDHIRQLATSLIEKQLQKLEAKLAFFNEMDNVTVRVREQLERSRQRLYQERAQI
IAARLGSSRPIPTSMPANRMPPNFANSVARPPMSMTSTRPPMSRPMGTIGPTPSNSFVST
TATGSSVRPSNQDKFSSLGMK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagcgccgggaagccgggagtctgccggcggctacgagctcagccggtgtc
ggggtcgagtcaccggcgtcagaaccagcttcgtcgcggcgccgagcgggagggcagaaa
aggaaagccacggcgctctcagcaggcaacacttcatcaacgccgtcgaaacgaatcact
cgcgacaagaactcaaattctcataccccgatctacaaccacaacggaccattgacgaga
gctcgccagggccctagcagtctcagtgcatcggccggaggaacggctttggctggcgga
aagctcgaaggggcacgtgatgacttgaagctggaggtggttgaggaactgaacaaagag
agtcaacagtgggaggctttggaggcgaaaatcgaggcggattttgaggcgattagatct
cgtgatagtaatgttcatgtggtgcctacacattgtggttggttttcatggacaagaatt
catcctctcgaggagcaaggattgccttcttttttcaatgggaagtcccagaaccgaact
cctgatatgtatatggagattcggaattggattatgaagaagttccatgcaaatccaaac
attcaaattgaattgaaagatttgtcagaactggaagttggatgtgtggatgataagcag
gaggtgctggagttcttggactactggggcttagtcaatttccatccattcccacccgaa
tccactgccacaaatgctgatggtgatagggtggcaaatgctgatgttgacatggcggct
aatattgacgatggtggagcagcaaaaaaggattccttgcttgaaaatttatatcacttt
gatgaaattcaattatgtcctcgtgttgctccaaagcctaaggtaatatctcccgctgcc
ccatctgggttgtttctagagtctgcaattgctgaagagttggtgaagcctgaggggcca
ggtgttgagtaccattgcaactcttgttcggctgattgctctcgtaagcgctatcattgc
caaaagcaggcagattttgatctatgcactgattgcttcaataatgggaagtttggctct
ggcatgtcatcatcggattttattcttatggtgcctgctgaagctgctggtttgagtggt
gggaagtggacagatcaggagacccttctcctcctcgaagcattggaactttatagagaa
aactggaatgagattgcagaacatgttgccactaaaacaaaagctcaatgtatattgcac
tttgttcaaatgccgattgaggatgtattttttgatcatgatgatagtgtagatgccaaa
tctaaagaaacttcagatcctactgcaaccaatgacgatacatctacccctaaagatgtt
cctgaaacatcagaaagtaagacaggtgcaaatgagggtcagacccaaacttcacctatg
gaaacttcaaaatcagaagatgcaaatgctacgaatatatgtcaggaaacttcaaaacct
gaagatgaaaataaagttaaagttggtgaggaaatgttaaaatctgaagacaccaatgaa
gtgaaagttccggagactggtgaaaacattgcattgaaggctcttagggaagcatttgaa
gctgttggttatcatccgcctgaaagcccacattcctttgctgaagttggaaaccctgtc
atggcattggtggcattcttgtcactgttggtggggcctgacgatgctactgcatcaact
cgtggttctttgaaatccatatctggcaattctcctgccattcagttggctgcaaggcac
tgctttgttttggaagatcccccaggtgacaagaaggaaccaactcagtctgagagtgtt
gctaaaattgccgatctggacactcaaaaagatgattacctggaagacagaaagaacaaa
gaggataacactaccacaatgctggatgaaagagatttgccaaatgatcatgacagcaag
ataactgaagagtctgttccagaagaaaagagaacatcaccctcttccaatgataaaccg
acagaggaattaaatgctgtaaaagaaacaggcaacaaagttattcctgaaagagttgaa
cctagtgatttgaatcaattaagcaatcaagaattgcccaaagaaaatcaaccaagcatt
gaggaggaatccaatgatttatcatccaaggttgctccaagctctgtgaaagagtctggt
gagggtaattcagttggagagccttcttcgtcggtagaggtagccaaggatgttgaattg
tcttctgatgctcatccatcggaaaggagtgaggctggtcagccagctatatcaaattca
gatgtagttccatctcaaccttcaaaggcaacaaaggatattgatacggtttctaattct
cttccacgggagattattgaacccgagcaaccagttgcatcaagttccaaagcagaggcc
tctcaaactttggaagcaccgaaggatgtggatatggtgtctaattcactgcctttggaa
tcgaatgagcctcaacagacagattcaattattgaaaatggaacaactgcaggtgaggat
caaacaaaagatgttaaagaagagaagcatgaccatagagaggcaaaagatgaacataat
attgataaaataaagcatgcagcagttactgcactctctgctgcagcagtgaaggcaaaa
cttcttgctaatcaggaagaggatcatattcgacaacttgctacatcattgatagaaaag
cagttacaaaagttagaagccaagttagctttctttaatgagatggataatgtgactgtg
agggttagagagcaattggagagatcaagacagaggctttaccaggaacgagctcaaata
attgcagctcgacttggctcttccagaccaattccaacatcgatgcctgccaacagaatg
ccaccgaactttgctaactctgttgcaagacctcctatgagcatgacttccacacggcca
ccaatgtcaagacccatggggactataggtcctaccccttctaactcatttgtctcaaca
acagcaactggaagttcagttcggccttcaaatcaggacaaattttcttctcttggaatg
aaatag
DBGET
integrated database retrieval system
