Pistacia vera (pistachio): 116110573
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Entry
116110573 CDS
T07386
Name
(RefSeq) nuclear pore complex protein NUP205-like
KO
K14310
nuclear pore complex protein Nup205
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116110573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116110573
03036 Chromosome and associated proteins [BR:
pvy03036
]
116110573
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116110573
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116110573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup192
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
116110573
NCBI-ProteinID:
XP_031252641
LinkDB
All DBs
Position
Unknown
AA seq
1879 aa
AA seq
DB search
MVSPKQLLSIIESTLLGPSPPSPAQRVELIHAVRNSLPSFQPLLSYPPPKPSDRAQLQSR
EVRLPDSPPISLDDQDVQIASKLSDDLHLNEIDCVRLLVSANQEWGFMGREPLEVLRLTS
GLWYTERRDLITALYVLLRAVVLDQGLEEDIVAEISKFLENLINGGLRQRLISLIKELNR
EEPSGLGGPLCERYVLDSRGALVERRAVVCRERLILGHCLVLSVLVVRTNQKDVKDAFSA
LKDSGAELNESNDTLKHQITFSLLFSLVIALISDALSAVPDRSSLLSCDASFRKEFHEIV
MAVGSDLNVEGFVGCVRLAWAVHLMLTNDEIAARDTVSSFSSNDLVLIRSSLETVFSNNI
FQFFLDKVLRTAAYQNDDEDMIYMYNAYLHKLITCFLSHPLARDKVKESKEKAMTVLNSY
RITGSHEVHDSNLLSQQAIETGALPFISLLEFVSEIYQKEPELVSSNDVLWTFVIFAGED
HTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSVGWRTLFDCLSIYDEKFKQSLQ
TSGAMLPEFQEGDAKALVAYLNVLQKVMENGNPVERKNWFLDIEPLFKLLSYENVPPYLK
GALRNAIAAFVHVSPVQKDAIWSYLERYDLPVVVGTNVGNSAQPMAGQVYDMQFELNEIE
ARREQYPSTISFLNLLNVLIAEEKDVSDRGRRFVGIFRFIYDHVFGPFPQRAYADPCEKW
QLVVACLKHFQMVLNMYDIQDEDIDSVVEQSSTLMQPSSLQMQLPMLELLKDFMSGKTIF
RNIMGILQTGVNSVITERTSQTYGPLLEKAVQLSLEIIILVFETDLLVSDFWRPLYQPLD
VILSQDHNQIVALLEYVRYDFSPKIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDY
AACLELRSEESQIVENSGEDPGVLIMQLLIDNISRPVPNVTHLLLKFDLDTSIERTILQP
KFHYSCLKIILEILDKLSKPDVNALLHEFGFQLLYELCLDPLTCAPTMDMLSNRKYQFFV
KHLDTVGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSGSTHQETCQIIFAHL
FGPDFIDDKADRAISSPFPDASGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSSTKYD
LLAEDILGNPTTSEKGGIYYYSERGDRLIDLASFSEKLWKKFNSVYPQLGNLGSEGELND
VRETIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQIVEVSLSRRISLLGNRSEILYQILDS
SLGASASPDCSLRMAFILCQVALTCMAKLRDERFLSLGGLNSDSVTFLDVIMVKQLSNGA
CHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQFLLLDEQDGE
DLDLQKIDKEQAELAHANFSILRTEAQAILDLVIKDATQGSEPGKTISLYVLDALICLDH
EKYFLSQLQSRGFLRSCLTNISNVSYQDGRHSLDSLQRACTLEAELALLLRIGHKYGKSG
AQVLFSIGALEHFSSCRAVDLQGSLRRVGTKLRRDVAKDIDRQRMIITPMLRLVFSFTSL
VDTSDFFEVKNKIVREVIEFVKGHQLLFDQVLQENVFGGDELIMEQINLVVGILSKVWPY
EASDEYGFVQGLFGIMHVLFSSDLESSMFPRSVRPPENQRRSELNTFRLCFSLSSYLYFL
VTKKSLRLQVSDGAGDYNAHSGLQQPTLNLLGSLLNYVTAVLERAAEEKSLLLNKIRDIN
ELSRQEVDEVINMCRRQDYVSSSDDIQKRRYVAMVEMCQVAGNRDQLITLLLPLVEHVLN
IILIHFQDSSAVSDSSGTMRMITYGAKSDLGQDISMFCGKLIPTLERLELLSEDKVGHNL
KVFRRVVTSLKEITIPKLT
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccctaagcaactcctctctatcatcgaatccactctccttggcccttcacct
ccatcgccagcccaacgggtcgagctcattcacgccgttcgcaactctttaccctctttc
cagccccttctctcttatccgccgccgaagccgtcggaccgagcgcaattacagtcgaga
gaagttaggcttccggattcaccgccaatatcgcttgacgatcaggatgttcagattgcg
tcaaaattgagtgatgacctgcatctcaatgaaatagattgtgttcgtttgcttgtttct
gcgaatcaagagtggggttttatgggacgagagccattagaagttctacgtcttacatca
ggactctggtacactgagagacgagatctaataacagcactctatgtactactaagggct
gttgtgcttgatcagggacttgaagaagatattgtggctgaaatttcaaaatttctggaa
aatcttatcaatggtgggcttagacagcggttgatttcccttatcaaggaactcaatcgg
gaagaaccttctggtttaggcgggcccctctgtgagcgttatgttcttgattctagaggt
gctcttgttgagcggagagctgtggtttgtagggaaaggctaatactgggacattgtctt
gtcctttctgttctagttgtgcgaacaaatcaaaaagatgtaaaggatgccttctctgct
ttaaaagacagcggtgcagaacttaatgagagcaatgacaccttaaagcatcagattacc
tttagtcttctcttctctcttgtcattgctttaatatcagatgctctcagtgcggtacct
gatagatcatctcttctgtcttgtgatgcttcttttaggaaagaatttcatgaaattgtg
atggctgtaggaagcgatttaaatgtggagggttttgttggttgtgtaaggctagcttgg
gcagtacatttgatgttgactaatgatgaaattgctgcaagggacacggtttcaagtttc
tcatctaatgatttggttcttataaggtcttctctggaaactgttttctcaaacaacatt
ttccagttctttctggataaagttcttcgaactgcagcctatcagaatgatgacgaggat
atgatctatatgtataatgcttatttgcacaagctgattacttgcttcctatctcaccca
cttgctagggacaaggttaaggaatcaaaggagaaagctatgactgtgcttaactcatat
cgaataactggatcacatgaagttcatgatagcaacttactttctcaacaggctattgaa
actggcgctttaccatttatctctctcttggaatttgtcagtgaaatttatcagaaggaa
ccggagctggtttctagcaacgatgtcctgtggacatttgtgatttttgctggagaggat
catacaaattttcaaacactggtggctttcttgaaaatgttgagtaccttggcttctagt
caagaaggcgcttcaaaggtttatgaattactccagggtaaagcgttccgctctgttggg
tggagaactttgtttgattgcttatcaatttatgatgaaaagttcaaacagtcccttcaa
acttctggggccatgttaccagagtttcaggaaggggatgcaaaagcacttgttgcatat
ttgaatgtccttcagaaggttatggaaaatggaaatcctgttgaaagaaagaactggttt
cttgatatcgaaccattatttaagcttcttagttatgaaaatgtgcctccatatttgaag
ggtgctctacggaatgcaatagctgcctttgttcacgtttctccagttcaaaaggatgct
atttggagttaccttgagcgttatgatctacctgtggtcgttgggacgaatgttgggaac
tctgcacagccaatggcagggcaggtttatgatatgcaatttgagctgaatgaaatagaa
gcaaggagagagcagtatccttcaacgatatctttccttaatctcttaaatgtactaatt
gctgaagagaaagatgtgagcgacagagggcgtagatttgttggcatcttcaggttcata
tatgatcatgtttttgggccattcccgcaaagagcatatgcagatccttgtgagaaatgg
caattggttgttgcttgtcttaagcattttcaaatggttttgaacatgtatgacattcaa
gatgaggatattgatagtgttgttgaacaatcatcgactctaatgcagccatcttcgctt
cagatgcagctccctatgttagagttgctaaaagatttcatgagtggcaagactattttc
cgtaatattatgggtatccttcagactggagtcaattcagtaattactgaacggactagt
caaacatatgggccacttttagaaaaggctgtgcaactgtctttggaaattatcatcctt
gtctttgagacggatttacttgtgtctgatttctggcgtcctttataccagcctttggat
gttatactctctcaagatcataatcaaattgtggctttgttggagtatgtaagatatgat
ttttcgccaaaaattcagcaatgctccatcaaaatcatgagtattctgagttcccgcatg
gttgggcttgtacaactgctgctaaaatacaatgcagcaagcagtttggtggaggattat
gcagcctgccttgagttacgatcagaagagagtcaaattgtagagaacagtggtgaggat
ccaggggttctcataatgcagcttctcattgataatatcagtaggccagttccaaatgtt
acgcatttattgctgaaatttgatcttgatacatctattgaacggacaattttgcagcca
aagtttcattacagttgcttgaagattatccttgaaatattggacaaactttcaaaacca
gatgtgaatgcattacttcatgaattcggttttcagctgctctatgagttatgcttggat
ccattaacatgtgctcctaccatggatatgttgagtaatagaaagtatcaattctttgtt
aagcaccttgatactgtcggtgtagctccactccctaaacgaaatagtaaccaggcactt
cgcatcagttccctccatcagagagcatggctactgaagcttttagctattgaattgcat
gctggttatgggagtggctccactcaccaagagacatgccagatcatctttgctcatcta
tttgggcccgactttattgatgataaggctgatcgtgcaatttcttcccctttcccagat
gctagtgggaccagaaccatcagtaagagcaaggttttagagttgcttgaagttgtccaa
ttcagatctccagatactgctatgaagctttctcagattgtttccagtacgaaatacgat
ttgctggcagaagacatacttgggaatccaacaacttcggaaaagggtggtatctactac
tattcggagcggggtgatcgtctaattgaccttgcttcgttcagtgaaaaattatggaag
aaattcaattctgtttatccccagttgggtaacttaggcagcgaaggagagctaaatgat
gttagagagacaattcaacagttgttgagatggggatggaagtacaacaagaaccttgag
gaacaagctgcccaacttcatatgttaacaggatggtcccagattgttgaggtctcttta
tctagacggatatctttgcttggaaacagatctgaaatcttatatcaaattcttgattcg
tccctcggtgcttctgcttctccggactgttcattaaggatggcatttatattgtgccag
gttgcccttacatgcatggctaaactacgtgatgaaagatttttaagcctgggtggttta
aattctgatagtgtcacatttcttgatgttatcatggtgaaacaattgtcaaatggtgct
tgtcactccctgttgtttaagctaatcatggcaattttgagaaatgaatcgtctgaagcc
ttgaggagacgtcaatatgccttgcttcttagctatttccagtattgtcaacatatgctt
gctccagatgttccaacaactgttttgcagtttttgttgcttgatgaacaagatggtgaa
gatctggatctccagaagattgataaagaacaagctgaactagctcatgccaatttctct
atattaaggacagaggctcaagccatcttggatttggtaataaaagatgcaactcaaggc
agtgaacctgggaagacaatctctctctatgttctggatgcactgatctgtcttgatcat
gaaaaatatttcttaagccagcttcaaagcaggggttttttaaggtcctgtttaacaaac
atcagtaatgtttcctatcaggatggcaggcattcactagactcattgcagcgagcatgt
actcttgaggccgaacttgcattgcttttgagaatcggtcacaagtatgggaaatctggt
gcccaggttctgttttcaataggagctctggagcatttttcttcatgcagagctgttgat
ttgcagggaagtttgagacgagttggcacaaagctccgaagagatgtagccaaggacatt
gacaggcaacggatgatcataactcctatgttgagattggtgttttctttcacatcgttg
gttgatacttctgacttttttgaggtgaagaataaaattgttcgtgaagtcatagagttt
gtcaaaggacatcagttactctttgatcaagttcttcaagaaaatgtttttgggggtgat
gaattgataatggagcagattaatcttgttgttggtatacttagcaaggtttggccttat
gaggcaagtgatgaatatggctttgttcaaggtctgtttggtattatgcatgtgcttttc
tctagcgatctggagagttcaatgtttccccggtcagtaagacctcctgagaatcagagg
aggtcagagttgaacacatttcgcttgtgcttcagtctaagctcctatctatattttctg
gtgactaagaaatcactgaggttgcaggtttcagatggtgctggtgattacaatgcccat
tctggactgcaacagcccacattgaatttgcttggttctcttcttaattatgtgacagca
gttcttgaaagagcggctgaagaaaaatctttactgcttaataagattcgggacataaat
gaactatcaaggcaggaggtagacgaagttattaatatgtgtcgccgacaagattatgtt
tcatcatcagatgacatacagaaaaggagatatgttgcaatggtggaaatgtgccaggtt
gctggtaatagggatcagctaatcaccttattacttcctcttgtggagcatgtattgaat
atcattctcatccattttcaggacagttctgctgtatctgatagcagtggtactatgaga
atgataacatatggtgccaagtctgacttgggacaggacattagtatgttctgcggaaag
ttaattccaacattagaacggcttgaattacttagtgaggataaagtcggccacaatctc
aaggtattccggagagtagttacttcacttaaagaaatcactataccaaagttgacatga
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