Pistacia vera (pistachio): 116120039
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Entry
116120039 CDS
T07386
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116120039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116120039
03036 Chromosome and associated proteins [BR:
pvy03036
]
116120039
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116120039
Coactivators
SAGA/TFTC/STAGA complex
116120039
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116120039
STAGA complex
116120039
TFTC complex
116120039
SAGA complex
116120039
SLIK complex
116120039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
116120039
NCBI-ProteinID:
XP_031261838
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MADNLPSQAPTPATPSMQTSPPKPLQSPPNPMLDPTPSSLTPSTPATSAPLLHRPPSQPV
ATPSTPQQQQNQSSSPSLDPQILQQQQQMVQNVNVAAMSNYQIPQTLNRSSSISRLNQIQ
QQQQQQQHSAYTVLRQQALYGQVNFNQQNQQQTQQNPQLGSSNLSRSGLIGQTGHLPMLT
GASAAQFNLQSQLLASPRQKTGLVQGSQFHPGNSPGQPLQGMQAMGMMGPLNLGSQLRAG
GALAYAQQRMNQGQMRQQLSQQNALNSPQVQNLPRTSSLAFMNPQLSGLAQNGQPGMMQS
SLSPQQWLKQMPTMSNPASPSFRLQQHQRQPQVLLQQQLASSSQLHQNSLALNPQQLSQL
VQQQQPQMGHPQMHQAQQQTHTQPQSQLQQQQQQLQQTHQQLQQQPTLHQQQHQQQQQSP
RLPGHAVQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSRGK
LDPDVEDLLLEIADDFIDSVTSFACSLAKHRKSSTLESKDVLLHLEKNWDLTVPGFSSEG
QKHQRKPLSSDLHKKRLDMIRTLMESSQPETNVNNTREMMRPGFSNQVGVNNFIRASPSS
EQFVSQAAGSQMLQQITRY
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatttaccgtcacaagcaccaacaccagcaaccccgtcaatgcaaacttct
ccccccaaacccctccaatccccgccaaaccctatgctggaccccactccctcctcctta
accccctccacccccgccacgtcagcgcccttactccaccgccctccttctcagcccgtc
gccaccccgtcgacacctcaacaacaacagaaccaatcttcctctccttctcttgaccca
caaattctccaacaacaacaacaaatggttcagaacgttaacgttgcagccatgtcgaat
taccaaatcccacaaaccttgaatcgatcctcctcaatctcacggctgaatcaaattcaa
cagcagcagcagcaacaacaacattctgcatacaccgtcttgaggcaacaagctttgtac
ggtcaagtgaatttcaatcaacagaatcagcagcaaacccagcaaaaccctcaactaggt
tcttctaatttgtcacgctcaggccttattgggcagacggggcacctgcccatgctgact
ggggcatccgctgcccagttcaatttacagtctcaattgctcgcttcgccgaggcagaaa
actggattagtgcaaggatcccaattccatcctggtaattcgcctgggcagcctttgcaa
ggaatgcaagcaatggggatgatggggccacttaatttgggctcacaattgagggctggt
ggggcccttgcttatgcacaacagcgaatgaatcaggggcagatgcggcagcaactgtca
caacagaatgctcttaactcccctcaggtccaaaacttacccaggacttcatctctggca
tttatgaaccctcagttatctggcctggctcagaatggacagccgggtatgatgcagagc
tctttgtcgccgcaacagtggttgaagcaaatgccgacaatgtctaaccctgcctcacct
tcattccgtctccaacaacatcagaggcagccacaagtcctcttacagcagcaactggct
tcgtcttcgcagttacaccagaattctttggccttgaacccacagcaattatcccagctg
gttcagcagcagcagccacaaatggggcatccacagatgcatcaagctcaacagcagaca
catacacagccgcagtcacagctgcagcagcagcagcaacaactacaacaaacacaccaa
caactacaacagcagccaaccttgcatcaacagcaacaccaacagcagcagcagtctcca
aggcttccaggtcatgcagtccagaaatctcttagcttgacaggatcacaaccagatgca
actgcctctggtacaactacacctggggggagttcaagccaaggaacagaagcaactaat
cagctccttggaaagagaaagatacaggatcttgtttcgcaggttgattcacggggaaaa
ctggatccagatgtcgaagatcttcttttggagattgcagatgactttattgactctgtt
acttcatttgcttgtagtctggcaaagcaccggaaatcatcaactttggagtccaaagat
gtattactacatttagagaagaattgggatttgacagttcctggattctcaagtgaaggg
cagaaacaccagaggaaaccgttgtcaagtgatctccacaaaaagcgtcttgatatgatt
cgtacattgatggaatcctcgcagcctgaaaccaacgtgaataatactagagagatgatg
agaccaggcttcagcaaccaagttggtgtcaataactttataagagcttcaccaagttct
gagcagtttgtttcacaagcagctggttctcaaatgctgcagcaaataacacggtattga
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integrated database retrieval system
