Pistacia vera (pistachio): 116129914
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Entry
116129914 CDS
T07386
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116129914
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116129914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
Jnk-SapK_ap_N
Cep57_MT_bd
Fas1-AflB-like_hel
CTK3
CREPT
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
116129914
NCBI-ProteinID:
XP_031271518
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MGSTFNPQILVEKLAKLNNSQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVMDNGDEFGRNAARRLINIWEERKVFGS
RGQILKEELVGRHLESYNRNGKHQGMKLQKQPIGNTVDKIVSGYQVVYGGQIDEDVVLNK
CRNAISSIEKVEKEIGSDIHSGQLHGSSLVEELQGQHATLRDCIEQLTAVESSRANLVNH
LREAFQEQELKLAQIRNELQAAQSKSEHVCRQLLNCDNVPMLAEQNTKEAHTSMAPPSFM
SGDREQSAPVMYTRQVSFAEKSGHVEEDTRKSAAAAVAAKLTASTSSAQMLSYVLSSLAS
EGVIGNSSKEHSGDFPSEKRPKIENEQSYLPPQNPQRPPVPSFPHPESLQHNITTTTQQL
TTNDPPPPPPSSPPPMPPLPPLPPFQMPQYIQNTAAMTSAPYSYNMSQPPPPTMPGYPGA
AAPITGMSPFAAPPTNPYQSFQGSDGNFYSQPSSVPMAPISRQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtacatttaatcctcagattttagtggaaaagctagccaagcttaacaactca
cagacgagcatagagactttatcacattggtgtatttttcatatgaataaggccaagcaa
gttgtagaaacatgggacagacaatttcattgctctccacgtgagcagagattggctttt
ctgtatcttgcaaatgacatcttgcagaatagtagaagaaaaggttctgagtttgttggt
gaattttggaaggttcttccagatgctcttcgtgatgtgatggataatggagacgagttt
ggaagaaatgctgcacgacggctgattaatatttgggaggagaggaaagtttttggttct
cgagggcaaattctgaaggaagagcttgtgggaaggcacctggaaagttacaacagaaat
gggaagcatcagggcatgaaattgcagaagcagcctattggaaatacagtggacaaaata
gtctcaggttatcaagttgtctatggtggccagattgatgaagacgttgtattgaacaaa
tgtaggaatgctattagctctattgagaaagtagagaaggaaattggtagtgacatccat
tctggacaattgcatggatcttcattggtggaggagttgcagggtcagcatgctacactg
agggactgcattgagcaattaacggcagtggagtcatcgagagcaaatcttgtgaatcat
ttgagggaagcttttcaggaacaggaattgaagctggctcaaatccgtaatgagttacag
gctgcacaatccaagtcagagcacgtctgtcggcagttactaaattgtgacaatgtgccg
atgctagctgagcagaacacaaaggaagctcatacttcaatggcacctccaagctttatg
tcaggagacagagaacagtcagctcctgtaatgtacactcggcaggtatcttttgctgaa
aaatctggtcatgttgaggaggacactcggaagtctgcagctgctgcagtggcagcaaag
ctaactgcttcgacatcctccgcccagatgctctcttacgtcctctcgtccttggcatct
gagggtgtcattggtaattcaagtaaagaacactcgggtgattttccttcagagaaaagg
cctaagattgagaatgagcaatcttacttgccaccacagaacccccagcggcctccagtt
ccttcctttccacaccctgaatctctgcaacataacataacaacgacaactcaacaatta
actacaaatgacccgccacctcccccaccatcatctcctccaccgatgcctccactacca
cctctgccaccgtttcagatgccccagtacattcaaaatactgcagctatgactagtgcc
ccatacagctacaacatgagccaaccaccaccccctaccatgcctggttatccaggagct
gcagctccaatcacgggcatgtctccttttgcagcacctccaacaaatccttatcagagt
tttcaaggttctgatggtaatttctatagtcaaccatcatcagtgccaatggcaccaatt
tctcgacagtag
DBGET
integrated database retrieval system
