Pistacia vera (pistachio): 116131273
Help
Entry
116131273 CDS
T07386
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
pvy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116131273
03015 mRNA surveillance pathway
116131273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116131273
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116131273
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116131273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
116131273
NCBI-ProteinID:
XP_031272794
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MADSTETTAASTSAPPPEPKRSWGDEVDDEEVEESKPGAELNVDGLAIDENKKINKFLDE
PEDSNIKAVTLGDTPYTSASTFEDLNLSPELLKGLYVDMKFQKPSKIQAISLPMILTPPY
KNLIAQAHNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLQKMGKHTGI
TSECAVPMDSTNYIPINKRPPVTAQIVIGTPGTIKRWMSAKKLSVSCMKILVFDEADHML
AEDGFKDDSLRMMKDIERSNAQCQVLLFSATFNDTVKNFVARVVKDYNQLFVKKEELSLD
SVKQYKVKCPDELSKVRVIKDRIFELGENLGQTIIFVRTRHSASTLHKSLVELGYDVTTI
QGALKQEDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHNTTEPDCEV
YLHRIGRAGRFGRKGAVFNLLMDDKDYMLMEKIERHFGSQISEVPSWNSVDDFKAALKAA
GLL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccaccgagaccaccgccgcctctacatcagcgccaccaccggagccgaag
cgatcctggggcgacgaagtggacgatgaagaggttgaggaatctaaacctggagctgaa
cttaatgttgatggattggctattgatgagaacaagaagatcaataagttccttgatgaa
cctgaagattcgaacattaaagccgttacacttggtgatacgccatacacatcagctagt
acatttgaagatttgaatctgtcaccagagctgttaaaaggattatatgtcgatatgaaa
tttcagaagcctagtaagattcaagctatcagtttgcccatgatattgactcctccatac
aaaaatttgattgctcaagcgcataatggttctggaaagaccacttgtttcgtgcttggt
atgttgagccgtgttgatccaaacctaaaggctcctcaagcgctttgtatttgtcctact
agagaattggcaattcagaatctggaagttctgcagaagatggggaaacacacggggata
acttcagaatgtgctgtgccaatggacagtactaattacattccaattaataagcggcca
ccagttacagcacaaatagtgattggcactcctggtactattaagagatggatgtcggca
aagaaattgagtgtcagttgtatgaagattcttgtttttgatgaagcagatcacatgctg
gctgaggatggctttaaagatgactctttgaggatgatgaaggacattgaaagaagcaat
gctcagtgccaggttcttctattttctgccacatttaatgacactgtcaagaattttgtg
gcacgagttgttaaagattacaatcaactctttgtcaagaaagaagagttgtcattagat
tcagtgaagcagtacaaagtgaaatgtcctgatgaactttctaaggttagggttattaag
gacagaatttttgaattaggagaaaacttggggcagaccatcatttttgtacgcacaaga
catagtgcaagcacattgcacaagtctcttgtggaacttggatatgacgttaccacgatt
cagggtgctctgaagcaagaagaccgagacaagatagttaaagagtttaaagatggttta
actcaagttcttatatcaactgacgttcttgcccgaggttttgaccagcaacaggttaat
cttgtcataaattatgatcttcctgtgaaacataacaccacagagcctgactgtgaggtc
tacctgcatagaattggccgggctggaaggtttggccgtaaaggagctgtgttcaatttg
ctgatggatgataaggattatatgctgatggaaaaaattgagcgacactttggttcccag
atatctgaggtaccatcatggaatagtgttgatgactttaaggcagcgctgaaggcagcc
ggtttgctgtga
DBGET
integrated database retrieval system
