Pistacia vera (pistachio): 116133161
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Entry
116133161 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116133161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116133161
03036 Chromosome and associated proteins [BR:
pvy03036
]
116133161
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116133161
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116133161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
116133161
NCBI-ProteinID:
XP_031274693
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MGNSEITFGQSSSSPFGSQSVFGQTNNASNNPFAPKPFGTTTPFGSTTSSVFGGTSTGVF
GAAQSSSPFSSTTTFGASSSPAFGNAMPAFGASSTPAFGGSSSAFGGSSVFGAKPAFGFG
STPTQTSPFGGTTQQSQPAFGSSLFGSSTPFGASSQSAFGATSTPAFGSTSTPAFGAAST
PAFGAASTPAFGATSTPAFGATSSPAFGATSTPAFGSTGTSFGVSTFGSGGAFGASSTLL
FGSSSNPAFGASSTPAFGASSTPTFGPSSAAAFGASSAPAFGASSTPAFGASSTASFSFG
SSPSFGQSTSAVGSSPFGTSTSPFGAQRSQATTPTFGSTPFGQSNFEGQRGGSRMAGYTR
TTEVDTGSCTQPVGMLESISAMPVYKDKNHEELRWEDNQLGGKGGPLPVGQSAGGIGFGV
SAAPSSPFAPSSVFGASSASPFSNTTSSNLFAPKTSTFTGSSFGTTISAAFGTSPFGVSS
TPNPFGSTSSAAPSIFGHGPTSTSALGANSPLSTFGSSSSLFNSXSSSGAMSSFGFGMNF
CNQSSPLFSSAAPGQTGSGFGLATSSFERXSTMSSLGTSNLFSTPSTGFCGMFLSTPSLA
SSSTQLFGQPTRVLELIAVKAITGNLYCAALPSVSMPFQLCQPAQSGGAFGFSNWLRHKQ
VDPFLLSNFGGQGGGSRVAAYTPTTEADTGSGRALHAGQSAGGYQLSLNLE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggggaattctgagattacttttgggcagtcatctagtagcccatttgggtcccaatca
gtctttgggcagaccaacaatgcaagtaacaatcctttcgctcccaaaccattcggtacc
acaaccccttttggttcgacaacaagttcagtgtttggaggtacttcaaccggtgtattt
ggtgctgcccagtcatcttcacctttctcgtccacaacaacctttggtgcatcgtcatca
ccagcctttggaaatgcaatgcctgcttttggagcatcttccactcctgcttttggtggt
tcatcatcagcatttggtggttcttctgttttcggtgcaaagcctgctttcggctttggg
tccactcctactcaaacaagtccttttggaggcacgactcagcaatcacagcctgcattt
gggagcagtttatttggttcctccacaccttttggtgcatcaagtcagtcagcatttggt
gctactagcactcccgcttttggttcgacaagcacccctgcatttggggctgcaagtacc
cctgcctttggtgctgctagtacccctgcttttggtgctacaagcactccagcctttggt
gctacaagttctccggcctttggtgctaccagcactccagcctttggtagcacagggact
tcatttggtgtatcaacttttggttctgggggagcatttggggcttcaagcacccttctc
tttggatcatcaagcaaccctgcatttggagcctctagcactcccgcttttggggcttca
agcactcctacttttgggccctctagtgctgctgcttttggggcttcaagtgctcctgcc
tttggcgcttcaagtactcccgccttcggggcatctagtactgcatctttcagttttggg
tcatctccttcttttggccagtcaacttctgcagttggtagcagcccatttggaaccagt
acatctccctttggagcacagagatcccaagctacaacaccaacatttggtagcacccct
tttgggcagtcaaattttgagggccaacgtggtggaagtagaatggctggttacacacgt
acaactgaagtagacactggcagctgtacgcagcctgttggaatgttggagtcaatatct
gccatgcctgtctataaagataaaaatcatgaggagctgagatgggaggataatcagttg
ggaggtaaaggtggaccacttcctgttggtcagtctgctgggggaattggctttggtgta
tcagctgctccatcaagccctttcgctccttcatcagtatttggggcatcatcagctagt
cctttttccaacactacatcttcaaatctatttgctcccaaaacttcaacttttactgga
tcaagttttggaaccaccatttcagctgcttttggtacctcaccttttggtgtatcgtct
acacctaatccttttggatcaacttcatctgcagctccttccatatttgggcatgggcca
acatcaacttctgcattgggtgccaattcacctctatctacttttggttcgtcatcatcc
ctcttcaatagtnaaagcagctcaggtgcaatgtcatcatttggctttggcatgaatttt
tgtaatcagtcatctccattgttcagttccgcggccccaggacagacaggttctggtttt
ggactggccacctcttcatttgaaaganatagtactatgtcttcgttgggtacttcaaat
ttgtttagcacaccttccactggtttttgtggcatgttcttgagcactccatcactagct
tcttctagcacacaattgttcggtcaaccaactagagttttagagcttattgctgttaag
gccattactggaaatttgtactgtgctgctttgccctctgtttctatgccattccaactg
tgtcaacctgctcagagtggcggtgcttttggatttagcaactggctcagacacaagcag
gtagaccccttcctgctgtcaaattttgggggccaaggtggtggaagtagagtggctgct
tacacacctacaactgaagcagatactggcagtggtagagcacttcatgctggtcagtct
gctgggggatatcagctttctctaaacttagaatga
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