Pistacia vera (pistachio): 116138168
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Entry
116138168 CDS
T07386
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116138168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116138168
03036 Chromosome and associated proteins [BR:
pvy03036
]
116138168
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116138168
Coactivators
SAGA/TFTC/STAGA complex
116138168
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116138168
STAGA complex
116138168
TFTC complex
116138168
SAGA complex
116138168
SLIK complex
116138168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116138168
NCBI-ProteinID:
XP_031279765
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MDDSRLTDFVTTFLKKKGFNEAETAFRAELQRKNNNSSNNNSIDVLNDPELSKFFRSFSE
SEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKKHIQEARTFFNS
FREDHEMLHLRDLQKLEGVLTPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQC
TKMLGIINERINFEVSPGQPSSISDDAEIVTLIGSNQDAANKINQKEVHWGLLEDSLESR
LEKTGGLLSDSEKAEGENKEGEVDENKKRSVEGGKQGTSMKKLKKDKAINATAKTSRPEA
NTVPVAPRVKSELALPVMPVEVEQSFLEDLRNRVQLSSVALPSVCFYTFINTHNGLNCAS
ISHDGSLVAGGFSDSSLKVWDMAKLGQQTRSLLVSAVSQGENDTTAKEDTLGANGSKRSY
TLFQGHSGPVYSASFSPLGDYILSCSADATIRLWSTKLNANLVCYKGHNYPVWDVQTEVE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcgcgcttgacggatttcgtgacgacgttcctgaaaaagaagggcttcaac
gaggccgagactgcttttagagctgaacttcaacgcaagaacaataacagctccaacaac
aattccatcgacgtactcaacgatcccgaactctccaagttctttcgctccttctccgaa
tcagaggatggtcctgcacgataccaggatgaatatagcaaactgaggtcatggacttat
agctccttggatctgtacaagcatgaattgcttcatgtgctctatccagtgtttatccac
tgtttcatggatctggtggctaaaaagcatatccaagaggcaagaacctttttcaatagc
tttcgtgaagaccatgaaatgctacacttacgagaccttcagaagttggaaggggttctt
actccctctcatctggaggagatggaatttgctcattctctaaggcatagcaaagtcaac
attaagatatgtcagtactcctatgagcttctgctgcagtatctacacaagacacaatgt
actaaaatgcttgggatcatcaatgaacgtattaactttgaagtttctccgggacagccc
agctcaatttccgatgatgctgagatagttacacttattggaagcaaccaggatgcagct
aataaaataaatcaaaaggaagtacactgggggttgcttgaagattctttagaaagccgc
ttggagaaaacaggaggtttactatcagattctgaaaaagcagaaggagaaaacaaagag
ggggaggtagatgagaacaagaaaagatcagtagaaggtggaaagcaaggcacttcaatg
aaaaagttgaagaaggacaaagctatcaacgcaacagcaaaaacatcacgtccagaggct
aacactgtgccagtggccccacgggtgaaatcggagcttgctttgcccgtaatgccagtt
gaggtggaacagtcttttcttgaagacttgagaaaccgtgtacagttgagcagtgttgca
ttgccatcagtctgcttttatacatttatcaacacacataacggtttaaattgtgcatcg
atatcacatgatggatccttggttgctggtggattctcagactcatcgttgaaggtttgg
gatatggcaaagcttgggcaacaaactagaagtttgttggtgtcagccgtttcgcagggt
gaaaatgatactacagcaaaggaagatactttaggggcaaatggtagcaaaagatcttat
acattatttcagggtcattcagggccagtatattctgccagttttagtcctcttggggat
tatattctttcctgctcagcagacgcaacaattcgattatggagcacaaaactaaatgcg
aatcttgtttgctacaagggtcacaactatcctgtttgggacgttcagacagaggtggag
tag
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integrated database retrieval system
