Pistacia vera (pistachio): 116139085
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Entry
116139085 CDS
T07386
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116139085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116139085
Membrane trafficking [BR:
pvy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116139085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
116139085
NCBI-ProteinID:
XP_031280624
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MSEMANIDPEGIDGVRMTWNVWPRTKVEASKCVIPLAASFSPIRSHPDIPSLPYAPLRCK
TCAAALNAFSRVDFTAKIWICPFCYQRNHFPPHYAAISETNLPCELYPQYTTVQYTLPHN
PNSSNLDPQLSPVFVFVLDTCMIEEELGFVKSALKQAIGLLPDNAMVGFVSFGTQAHVHE
LGFSELSKVYVFRGNKEISKEQVLEQLGLSSSGRRAAGGYQKGAPNAFPNSGVTRFLLPA
SECEYTLNSLLDELQPDQWPVQPRTRASRCTGVALSVAAGLVGACLPGTGARIIALVGGP
CTEGPGTIVSKDLSEPVRSHKDLDKDAAPYFKKAVKFYDNFAKQLVSQGHVLDLFASALD
QVGVAEMKVAVEKTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEIICSKDV
KIQGIIGPCTSLEKKGPNVADTVVGEGNTTAWKMCGLDKSTCLTAFFDLSSSERSNTPGT
INPQLYLQFLTSYQNPEGKSMLRVTTITRQWVDSAVSSEELVQGFDQETAAVVMARLTSL
KMEMEEGFDATRWLDRSLIRLCTKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQV
FNNSPDETAYFRMLLNRENITNAAVMIQPSLISYSFNSLPQPALLDVASIAADRILLLDS
YFSVVIFHGMTIAQWRNMGYQNQPEHQAFAQLLRAPHDEAQLIIRDRFPVPRLVVCDQHG
SQARFLLAKLNPSATYNNANDMAAGSDVIFTDDVSLQVFIEHLQRLAVQS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatggccaacatagatcctgaaggaatcgatggagttcgtatgacctggaac
gtctggcctcgcaccaaagttgaagcctccaagtgcgtcatcccactcgccgcttctttc
tctccgatccgttctcatcctgacattccttctctaccttatgctcctttacgttgcaaa
acatgtgctgccgctctcaacgctttctcgcgcgttgatttcaccgccaagatctggatc
tgccctttctgttaccaacgcaaccattttccacctcattatgctgcgatttccgaaact
aatcttccctgtgaactctaccctcaatacaccaccgtccaatacaccctccctcacaat
cctaattcttccaatcttgatccccaattgtctcctgttttcgtcttcgttcttgacacg
tgtatgatcgaggaggaattagggtttgtcaaatcggccttgaaacaggccatcggtttg
ttgcctgataacgccatggttggcttcgtctcctttggaacgcaagcgcacgtgcatgaa
ttggggttttctgagttgtcaaaagtgtatgttttcagaggcaataaagagatttcaaaa
gaacaggtcttggaacaattaggactttcttcttctggaagaagagctgccggaggatat
caaaaaggcgcgcctaatgctttccccaattccggcgtcacgcgcttcttgttgcctgcc
tctgagtgtgaatacacgctcaattcgttgttggatgaattgcaaccggatcaatggccg
gtgcaaccgcgtacccgagcatcacggtgcactggtgtggctcttagtgtcgcagcgggg
ttggttggagcctgtttgccgggtactggggctagaattattgctttggtgggaggtcct
tgtacagaaggcccaggcacgattgtatcaaaagatttgtcagaacctgtgcgttcacat
aaagatcttgacaaggatgctgctccatattttaagaaagcggtcaaattttatgataat
tttgcaaagcaattggttagtcaaggtcatgtcttagacctttttgcttctgctcttgat
caggttggggttgcagaaatgaaagtcgcagttgagaagactggggggcttgttgttcta
tctgaaagttttggtcattctgtgtttaaagactctttcaagcgagtttttgaagatgga
gaacagtctcttggcctctgttttaatggcacgcttgagatcatttgttctaaggatgtc
aagattcaggggatcatcggaccttgcacatctttggagaagaaaggaccaaatgttgcc
gatactgttgtgggagagggcaatactactgcttggaaaatgtgtggccttgacaaaagt
acttgcttaactgccttttttgatctttcatcaagtgagcggtcaaatactccaggaact
attaatccacagttgtatttacagtttcttacaagttatcaaaatcccgaaggtaaatcg
atgcttcgagtcacaaccataactagacaatgggtagatagcgcagttagctcagaggaa
ttggtacaaggctttgatcaagagactgctgctgtggtaatggcaagattaacttccttg
aagatggagatggaggagggatttgatgccactcggtggttggatcggtcactcattcgt
ctctgtacaaaatttggtgactatcgtaaggatgatccatcatccttcactttaaaccca
agtttttctctgttccctcagtttatgtttaatctgcggcgatctcagtttgtacaggtt
tttaataacagtccagatgaaactgcctattttcgcatgttattaaaccgggaaaatatt
acgaatgctgctgtcatgatccaaccatcattaatatcgtattcattcaattcactgccc
caaccagcgttgttggatgtggcttccattgcagctgatcgtattctcttgctggattca
tattttagtgttgtcatattccatgggatgacaatagcacagtggcgtaacatgggttac
caaaatcagccagaacatcaggcatttgcacaactgttgcgagctcctcatgatgaggct
caactgatcattcgggatcgttttcctgttcctagattggtggtctgtgatcagcatggc
tcccaggcaagattcttattggcaaagttgaacccatcagctacatataacaatgccaat
gatatggccgctgggtcagatgtgatattcacagatgatgtgagccttcaagtcttcatt
gagcatcttcaaaggctagctgtgcaatcttga
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