Pistacia vera (pistachio): 116146105
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Entry
116146105 CDS
T07386
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116146105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvy03032
]
116146105
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116146105
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116146105
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116146105
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116146105
Bloom's syndrome complex (BTR)
116146105
FA (Fanconi anemia) pathway
116146105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3052
Motif
Other DBs
NCBI-GeneID:
116146105
NCBI-ProteinID:
XP_031287376
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MKKTPLAMQSGSEKQKKKNIFEKEGLVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLM
PTGGGKSICYQIPALVKPGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTLQVRNKI
HEDLDSGKPSLRLLYVTPELIATSGFMSKLRKIHSRGLLNLIAIDEAHCISSWGHDFRPS
YRKLSSLRNCLPDVPVLALTATAAPKVQKDVIESLCLQNPLVLISSFNRPNLYYEVRYKD
LLDDVYDDLCNALKSIGDICAIVYCLERTTCDELSAHLSKSGISCAAYHAGLNNKLRSSI
LDDWISSKIQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSRSLL
YYGMDDRRRMEFILSKAESKNLQPSSSQGGLSKNSMSNFNQMVEYCEGSGCRRKKILESF
GEQVSASLCKKTCDACKHPNLVAKYLEELTTTCALQQKNRFSQIFISSQDMIQEEQVSEF
WNRDDEASDSEEDISDSDDGVKVVKSLSKSKFSTKSGINEKIEFLQRAEESYYGNKNSDK
QVNKLNKNAISESLREASKQRLVNALTQAQQRLGSLSIEFESSATFLENECYKSYGKSGK
SVYYSQMASTIRWLSTTNSTDLTNRLCTNTSSSSENIICKEKSPVAPSSLLDQPAEITNE
HNCSNARSETWMNALPKESASPNTQQPVIPSFSEFVNRRKAKDSRLDNASQNQSPEKNLK
RTKLQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgccattggcgatgcaaagtggaagtgagaaacaaaagaagaagaatata
ttcgaaaaggaaggtctagtgaaactcttgagatggcatttcggccacgctcaatttagg
gataaacagcttgacgctattcaagcggttttatcagggagagattgtttctgtttgatg
ccaactggtggtggaaagtcaatctgctatcaaattcctgctctggttaaacctggaatt
gtacttgttgtttctcctttaatagctctgatggaaaaccaagtgatggcgttgaaggag
aaaggaattgctgctgaatttctgtcttcaacacagacactacaagtgagaaataagata
catgaagaccttgattctggaaaaccatcattgagactattatatgtaacaccagaactg
attgcaacatcaggatttatgtcaaagctgaggaagattcattcaagagggttgttaaat
ctcattgccatagatgaggcacattgcatctcatcgtggggccatgattttaggcctagt
taccgtaagctctcatctttgaggaactgcctcccagatgtaccagtattggcactgaca
gcaactgctgctcccaaagttcagaaggatgtgatagagtccttatgcttgcagaaccct
ctagtccttatatcttcttttaatcgtccaaatttatattatgaagttcgatacaaagat
cttttagatgatgtctatgacgatttgtgtaatgctctcaagtctattggagatatctgt
gcaattgtttactgtctcgaacgcacaacttgtgacgagttgtctgctcatctttccaaa
agtggcatttcttgtgctgcttatcatgcaggcttgaataataaattgcggagctccata
ttagatgattggatttcttccaagatacaagttgttgtggctacagttgcttttgggatg
ggtatagatagaaaagatgttagagtggtttgccacttcaatattccgaagtcaatggaa
gccttttatcaagagtcaggtagagctggtcgtgatcaattgccctctagaagtttgttg
tattatggaatggatgaccgcagaaggatggaattcattctaagcaaggctgagagcaag
aacttacagccctcaagctctcagggagggttgtcaaaaaattcaatgtccaatttcaat
cagatggtcgagtattgtgaaggttctggatgccgcaggaaaaagattcttgagagtttt
ggggaacaggtatctgcatcactatgtaaaaaaacatgtgatgcctgcaaacatccaaac
ctagttgccaaatatttggaagagttaacaactacatgtgctttacagcaaaaaaatcgt
ttctctcaaattttcataagctctcaagatatgatccaagaagaacaagtttcagaattt
tggaaccgtgatgatgaagcaagtgactctgaagaagatatatctgactctgatgatggc
gtcaaggttgtcaagagcttatccaagtcaaagttctcaacaaaatcaggaataaatgag
aagattgagtttttgcagcgtgcagaagagagttattatgggaataaaaactctgataaa
caggtcaataaactcaacaagaatgcaatatctgaatctctgagggaagcaagcaagcag
agattagtaaatgctctgacgcaggctcagcagcggcttggcagcttaagcattgaattt
gaatcatcagccactttccttgaaaatgaatgctataaaagctatggaaagagtggaaaa
tcagtctattattcccaaatggcaagtactattaggtggctgtcaaccacgaattccact
gacctaactaatcgactgtgcaccaataccagttcctcttcagagaacattatctgtaaa
gaaaaatctcctgtggcgccatcatctttgttggatcaaccagcagaaattactaacgaa
cataattgcagcaacgctaggtccgaaacctggatgaatgctctgccgaaggaaagtgct
tctcctaatacacaacagccagtgattccatccttctcagagtttgtcaaccgcagaaag
gccaaggacagccgactggataacgcatcacagaaccagtcaccagagaaaaatttgaag
aggacgaagttgcagtag
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