Pectobacterium parmentieri WPP163: Pecwa_0501
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Entry
Pecwa_0501 CDS
T01106
Name
(GenBank) transcriptional regulator, AraC family
KO
K02854
AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwa03000
]
Pecwa_0501
Transcription factors [BR:
pwa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pecwa_0501
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ACX86338
LinkDB
All DBs
Position
548153..549007
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AA seq
284 aa
AA seq
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MATAIRGLKLQTEDYFLTDKNAVMVAERHPQPVFPLHHHDFDELVIVWRGNGLHLWNDVP
YRITRGDMFYVSAHDRHSYESVHELELDNILYIRNRLTLSADWQMLLPGGEHPQSQRHWC
LGSEGMDTIREKVDALTQECMKSDALSLQLSEALLLQIALLAARYRHTPDNPQLADAHQL
DMLMNALRASIAAPFRFEAFCEQHHFSARSLRSRFKEQTGMSVPHYLRQLRLCKAMELLR
YDLQTIGEVAALCGFEDSNYFSVVFHQAFGVSPSAYRQRFLDAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcaatacggggtttgaaattacagactgaagactatttcctcactgacaag
aatgccgtgatggttgccgaacggcacccacagccggtgttcccgctgcatcatcatgat
tttgacgaactggtcattgtctggcggggcaatggtctgcacctctggaatgatgtgcct
taccgtattactcgcggcgatatgttctatgtttccgcgcacgatcgccacagctatgaa
tccgtccatgagcttgaactggacaacattctctatatccgcaatcgcctgacgttatcc
gccgactggcaaatgttactgccgggcggagaacatccacaaagccagcgccactggtgt
ttgggctcggaaggcatggataccatccgtgagaaggtggatgcgctgacgcaagagtgt
atgaaatcggatgcactgtcgctgcaactgagtgaggcgttgctgttgcagatcgctctg
ttggcagcacgctatcgccacacgccggataatccgcaattggcggatgcccaccagcta
gatatgctgatgaatgccctgcgcgctagtattgctgcaccgttccgttttgaagccttc
tgtgaacaacaccactttagcgcgcgcagtttacgttcgcgctttaaagaacagactggc
atgagcgtgccgcattacctgcgccagctacggctatgcaaggcgatggagctgctgcgt
tatgacttgcaaacgatcggtgaagttgcggcactgtgcggttttgaagacagcaattac
ttttctgtggtgttccatcaggcgttcggcgtttcgcctagcgcctaccgccagcgcttc
ctggatgcggagtga
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