Pectobacterium parmentieri WPP163: Pecwa_1908
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Entry
Pecwa_1908 CDS
T01106
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_1908
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Pecwa_1908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
zinc_ribbon_2
DZR
AAA_22
SLFN-g3_helicase
zf-tcix
AAA_16
MciZ
AAA
Motif
Other DBs
NCBI-ProteinID:
ACX87688
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Position
complement(2069548..2071308)
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AA seq
586 aa
AA seq
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MSFTLRPYQREAVSATLDYFRRHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCAWDLEADIFAAGLQQRESQGKVVFGSVQSVARNLDQFDNAFSLLIIDECH
RISDDDNSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDEQCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVVQYDFSRLVARSSGLFSEADLNLELKRQQRITPH
IISQVIDYAQTRRGVMIFASTVEHAKEIATLLPAGQAALVSADTPPAERDALIDAFKQQS
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPGKTDCLILDYAGNP
HDLYTPEVGNSKPHAGSQPVQVFCPECSFANLFWGKTTPDGDIIEHYGRRCQGWEMAENG
QRQQCDFRFRFKVCPHCGAENDIAARRCHQCNEVLVDPDDMLKAALKLKDALVLRCSGMS
FEQGQDAKGEWLKITYHDEEGAEVSERFRLHSTAQRHVFLQQFLRVHQRAPGTPFNWQNA
ADVIAQQILLRPPDFVVARKNGKFWQIREKLFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacactacggccttaccagcgtgaagcggtttccgccacgctcgactatttt
cgccgtcatacccaaccagccgtcatcgttttgcctactggcgcagggaagagtctggtc
atcgccgaattagcacggcttgcacgcggccgtgttttggtgctcgctcacgtcaaagaa
ctggtggcgcaaaatcacgccaaatactgtgcctgggatttggaagcggatatcttcgct
gcggggctgcaacagcgagagagccagggaaaagtggtctttggcagcgtgcagtccgtt
gctcgtaacctcgaccagttcgataatgcgttctcactgttgatcattgatgaatgccac
cgcatcagcgacgacgataacagccaatatcaacaaatcatccagcatctgcaaaaaacc
aatccgcagttacggttactcggcttaaccgcaacgccctatcggcttggcaaaggctgg
atatatcagtatcactatcacggcatgatacgtggtgacgaacagtgtttgttccgcgac
tgcatctatgagctgccgctacgctatatgatcaagcatggctttctggtgccgcctgac
cggttggatatgccagtggtgcaatatgattttagccggctcgtcgcccgtagcagcggg
ctattcagcgaagctgacctgaatctcgaactcaaacgccagcagcgcattacgccgcat
atcatcagtcaggtcatcgattatgcgcaaacacggcgcggcgtgatgatttttgcctcc
accgtcgagcatgccaaagagattgcgacgctgttaccggcgggtcaggctgcgctggtc
agcgccgacacgccacctgccgagcgtgatgcgttgattgacgcttttaagcaacagtct
cttcgctatctggtcaacgtggcggtactgacaaccggctttgacgctccgcatgtcgac
cttattgccattctccgcccgactgagtctgtgagtctgtatcagcaaattgtcgggcgc
ggtctgcgtttgtacccgggaaaaacggactgcctgatactggattacgcaggcaaccca
cacgatctctatacgccagaagtcggcaacagcaagccgcatgctggcagccagccagtg
caggtcttctgccctgaatgtagttttgccaatctgttctggggaaaaaccactcccgat
ggcgatatcatcgaacactatggccggcgctgtcagggctgggaaatggcggaaaatggg
caacgccaacagtgtgattttcgttttcggtttaaagtctgtccgcactgcggcgcggaa
aacgatattgccgcacggcgctgccaccagtgtaatgaagtattggttgaccccgatgac
atgctaaaagcggcgctaaagttgaaagatgcgttggttttacgctgtagcggcatgagc
ttcgagcagggacaggatgcaaaaggagaatggctgaaaatcacctatcatgatgaagaa
ggtgccgaagtgagtgaacgttttcgcctacactccaccgcgcagcgccacgtttttctg
caacagtttttacgtgttcaccaacgcgcaccgggaacgccgtttaactggcagaatgcc
gccgatgtcatcgcacagcagatattattgcgccctcccgactttgtcgtcgcccgtaaa
aacgggaaattctggcaaatacgcgaaaagctctttgattatcagggccgctttcgccgc
gccaacgaactccgcggctaa
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