Pseudoxanthomonas winnipegensis: MWN52_05740
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Entry
MWN52_05740 CDS
T09190
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pwi
Pseudoxanthomonas winnipegensis
Pathway
pwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWN52_05740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwi03019
]
MWN52_05740
03009 Ribosome biogenesis [BR:
pwi03009
]
MWN52_05740
Enzymes [BR:
pwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MWN52_05740
Messenger RNA biogenesis [BR:
pwi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MWN52_05740
Ribosome biogenesis [BR:
pwi03009
]
Prokaryotic type
rRNA helicases
MWN52_05740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
P-loop_SecA
adh_short
Motif
Other DBs
NCBI-ProteinID:
WJI16785
LinkDB
All DBs
Position
1312272..1314200
Genome browser
AA seq
642 aa
AA seq
DB search
MSSETAAPAVPFSALGLSAPVQAALVAVGYESPSPIQAATIPAMLAGRDVLGTAQTGTGK
TAAFALPVLSKLDLSAGKPQVLVLAPTRELAIQVAEAFQKYAAKIPGFHVLPIYGGQSYY
PQLQALKRGVHVVVGTPGRVIDHLERGSLDLSGLTTLVLDEADEMLRMGFIDDVETVLQK
TPPTRQVALFSATMPAQIRRIAQTYLNDPAEVTIASKTTTSANISQRYWFVSGLHKLDAL
TRILEAETFDAMIIFARTKAGTEELAEKLQARGLAAAAINGDMQQAQREKTIAQLKDGKL
DILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVTPREKSM
LRAIERATRQPITEMQLPTVEAVNDRRVARFLARITDTLATGEAGEYRALIETYEREHNV
PAVDIAAALARLLQGDTPLLLSAADRAPRGERLERAARPERSERYERAPRPERAERGERP
PRFEPGERSERARPERPAHASFDEAPAERPRRAPAGEAEVGMERYRIEVGHAHGVKPANI
VGAIANEAGLESRYIGRIDIQDDYSILDLPEGMPRETLTHLKKVWVSGQQLKIHKVGEDA
GDEAPRGFRPASARPGAGKPRPGGKPGFKPAAKPHRKGPPKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgaaactgccgcacccgcggtgccgttctccgcccttggcctgtccgcgccg
gtccaggccgccctggtcgccgtcggctacgagtcgccttcgcccatccaggccgccacc
atcccggcgatgctggccggacgcgatgtgctgggcaccgcgcagaccggcaccggcaag
accgcagcgttcgccctgccggtgctgtccaaactggacctgtcggccggcaagccgcag
gtgctggtgctggcgcccacgcgcgagctggccatccaggtggccgaggcgttccagaag
tacgcggccaagatccccggcttccacgtcctgcccatctacggcggccagagctactac
ccgcagctgcaggcgctcaagcgcggcgtccatgtggtggtcggcaccccgggccgggtg
atcgatcacctggagcgcggctcgctggacctgtccggcctgaccacgctggtgctggac
gaggccgacgagatgctgcgcatgggcttcatcgacgacgtcgagaccgtgctgcagaag
acgccgcccacccgccaagtggcgctgttctcggcgaccatgccggcgcagatccgccgc
atcgcccagacctatctcaacgatccggccgaagtcaccatcgcgtccaagaccaccacc
tcggccaacatcagccagcgttactggttcgtctcgggcctgcacaagctcgacgcgctg
acccgcatcctggaggccgagaccttcgatgcgatgatcatcttcgcccgcaccaaggcc
ggcaccgaggagctggccgagaagctgcaggcccgcggactggccgccgccgcgatcaac
ggcgacatgcagcaggcgcagcgcgagaagaccatcgcccagctcaaggacggcaagctg
gacatcctggtggccaccgacgtggccgcgcgcgggctggacgtggagcgcatcagccac
gtgctgaactacgacatcccctacgacaccgagagctacgtccaccgcatcggccgcacc
ggccgcgccggacgcagcggcgaggcgatcctgttcgtgaccccgcgcgagaagtcgatg
ctgcgcgcgatcgagcgcgccacgcgccagccgatcaccgagatgcagctgcccacggtc
gaggcggtcaacgaccgtcgcgtggcgcggttcctggcgcgcatcaccgatacgctggcc
accggcgaggcgggcgagtaccgcgcgctgatcgagacctacgagcgcgagcacaacgtg
ccggcggtggacatcgccgcggcgctggcgcggctgctgcagggcgacacgccgctgctg
ctgtcggccgccgaccgcgcgccgcgcggcgagcgtctcgagcgcgctgcgcgtccggag
cgcagcgagcgctacgagcgtgcgccgcgccccgagcgcgctgaacgcggcgagcgtccg
ccgcgtttcgagccgggcgagcggagcgaacgcgcgcgcccggagcggccggcgcatgcg
tccttcgacgaggccccggccgaacgcccgcggcgtgcgccggccggcgaggccgaggtc
ggcatggagcgctaccgcatcgaggtcggccacgcccatggcgtcaagccggccaacatc
gtcggcgccatcgccaacgaggccgggctggagagccgctacatcggccgcatcgacatc
caggacgattactcgatcctggacctgcccgagggcatgccgcgcgagaccctgacccat
ctgaagaaggtctgggtctcgggccagcagctgaagatccacaaggtcggcgaggacgcc
ggcgacgaggccccgcgcggtttccgccccgcctcggcccgccccggcgctggcaaaccg
cgccccggcggcaagcccggcttcaagccggcggccaagccgcaccgcaagggcccgccg
aaggactga
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