Pseudomonas xanthosomatis: KSS93_07590
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Entry
KSS93_07590 CDS
T07606
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS93_07590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxa03021
]
KSS93_07590
Transcription machinery [BR:
pxa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS93_07590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_23
HTH_IclR
GerE
HTH_7
Xre-like-HTH
HTH_28
HTH_10
TnsD
HTH_29
HTH_11
Sigma70_r3
HTH_36
DUF1492
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QXH47760
LinkDB
All DBs
Position
complement(1705760..1706254)
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AA seq
164 aa
AA seq
DB search
MSSALSSTVEGLYLAHHNWLTGWLRRRLGCPQSAADLAQDTYLRLLQAREAPQLVEPRAF
LATVAKRVLCNHFRRQELERAYLQALAQVPEQVAPSEEDKALIFETLLELDRLLDGLEPL
VKRSFLLAQVDGLGQGEIAHELGISLATVKRYLKKAALRCYFAL
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcgccctctcttccactgtcgaaggcctctacctcgcccaccacaactggctc
accggctggttgcggcggcgcctgggctgcccgcagagcgcggcagacctggcccaggac
acctacctgcgcctgctgcaagcccgcgaagcgccgcaactggtcgaaccccgcgccttc
ctcgccaccgtggccaagcgcgtgctgtgcaaccactttcgccgccaggaactggaacgc
gcctacctccaagccctggcccaggtgccggaacaggtggcgccgagcgaggaagacaag
gcgctgatcttcgagaccctgctggaactggaccgcctgctcgatggcctggagccgctg
gtcaagcgcagcttcctgctggcccaggtggacggcctgggccagggcgagatcgcccac
gagctgggcatctcgctggccacggtcaagcgctacctgaaaaaagcagccctgcgctgc
tacttcgccctgtga
DBGET
integrated database retrieval system
