Pyrus x bretschneideri (Chinese white pear): 103930366
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Entry
103930366 CDS
T03446
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2 isoform X2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
pxb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103930366
09124 Replication and repair
03420 Nucleotide excision repair
103930366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103930366
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103930366
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103930366
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103930366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
103930366
NCBI-ProteinID:
XP_009338006
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLCIEVPVTA
KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLVHGVVL
PREPMPSNITVRLPSLEDLQAFALEQWECFLLQLINSSQSERPSNISSSMMKTFQRGLLS
QRDREAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHVTGE
AYNINTLNERQRNIIKDLADLGLIKLQQGRKDSWFIPTELATNLSVSLTDSSSRKQGFVV
VETNFRLYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYSAFENGITGEQIISFL
QQNAHPRVAERVPSVPENVTDQIRLWETDLNRVEMTPAYYYDEFPTRELLEGASDFARGY
NALLWEDVNSKKMRLVVKAENHVQMREYLGRQRQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgaggatcatagcgaagaatttcatggacatggtggccgccctgcccgcc
atgaagctcgacaagctatacgagaatgcattcatctgcgaagcaattctcaggtctctg
ccaccgttggctaagaaatatgtcttgcaactgttgtgcattgaagttccggtgactgcc
aagtcaatggaggagtgggtgcttcctgatggggtctcgaaacatagagttgcaattgat
cggctgattcaattgagaatatttactgaaactgtggacaggaagagggaaacaacttac
acactaaatcctatatttcagactaatctcaagaagcttctggtacacggtgtagttttg
ccaagagaaccaatgccttcaaatataacagtgaggctcccaagcttggaggatcttcag
gcttttgccttagaacaatgggagtgtttcttgctgcaacttatcaactcatctcaaagt
gagaggccatcgaacatcagttcgtctatgatgaaaactttccagcggggtcttttgagt
caaagggatagagaagctccaagattaactgaaagtggtttccagttcttgttgatggat
acaaatgcgcaactctggtacatcatcagagagtacatctctaactcggaggagcgtggg
ttagattctgcagatttgatttcgtttctgctagaacttagttttcatgttacaggcgag
gcatataacataaatacattgaatgagaggcagaggaatataatcaaggatcttgcagat
ttgggactgatcaaacttcagcagggaaggaaagacagttggtttatacctactgaatta
gctactaatctgtcagttagcttgacagactcatcatcgaggaaacagggatttgttgtt
gtggaaacaaacttcaggctctatgcctactcaacatctaaattacattgtgaaatttta
cgtcttttctcaagggtagaatatcaacttccaaaccttattgttggagcaataacaaaa
gaaagtttgtacagtgcttttgaaaatggcatcactggagaacagataatatcttttctt
cagcagaatgcacatccacgtgttgccgagagagtaccatccgtacctgagaacgtcaca
gatcagattaggctgtgggaaacagatctgaatagggttgagatgactccagcttattat
tacgatgaatttccaaccagggaactcctcgagggtgcttctgactttgcgcgaggctat
aatgctctgctgtgggaggatgtaaactcgaaaaagatgcgtttagtggtcaaggcagaa
aaccacgtgcaaatgcgagaatatcttggacgtcaaaggcagtaa
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