Pyrus x bretschneideri (Chinese white pear): 103932134
Help
Entry
103932134 CDS
T03446
Name
(RefSeq) histone deacetylase 9-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103932134
03083 Polycomb repressive complex
103932134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103932134
Enzymes [BR:
pxb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103932134
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103932134
HDAC complexes
Sin3A-HDAC complex
103932134
BRAF-HDAC complex
103932134
REST complex
103932134
SHIP complex
103932134
MiDAC complex
103932134
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103932134
Heterochromatin formation proteins
Other heterochromatin formation proteins
103932134
Chromatin remodeling factors
NuRD complex
103932134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Plasmod_MYXSPDY
Motif
Other DBs
NCBI-GeneID:
103932134
NCBI-ProteinID:
XP_009339956
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MPSKDKIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEVGEREGKFYAINVPLKDGIDDASFSRLFNT
IISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWTVETGVLLDSELPNEIPDNEYIKYFSPDCSLRIPSGHIENLNSKSYLSTIK
IQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERLNQHTQDKNIQRDDEYYEGD
NDNDHMEDM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaaggataaaatcgcctatttttacgacggggatgtgggtagcgtctacttt
gggccgaaccaccccatgaaaccgcaccggctatgtatgacccatcatctcgtcctctcc
tatgatctccacaaaaagatggaaatttatcggccgcataaggcgtatccggtggagctt
gcgcaattccattcagctgactatgttgagtttctgcacaggattacgcccgacacccag
cacttgttctcgaatgaaatggcaagatataatcttggagaagattgccctgtatttgat
aacttatttgaattttgtcaaatttatgctgggggaacaatagatgctgcacgtaggttg
aacaataaactttgtgatattgctatcaattgggctggtggactacaccatgccaaaaag
tgtgaggcatccggattttgttacatcaatgacttggtcttggggatcttggagcttcta
aaacatcatgcccgagtattgtatattgacatagatgtgcatcacggtgatggtgtagaa
gaagctttctattttactgatagggtgatgactgttagctttcataagtttggggatttg
tttttcccaggaacaggtgatgttaaggaagtaggagaaagagaaggcaagttttatgcc
atcaatgtcccactaaaagatggaattgatgacgctagcttcagtagacttttcaatact
attatttccaaggttgttgagacatatctaccaggcgcgatagttctccagtgtggagca
gattctcttgctggagaccgtttgggctgcttcaatctctccattgatggtcatgctgaa
tgtgttaagtttgtgaagaaattcaatatacccttactggttacaggaggtgggggatac
acgaaagagaatgttgctcggtgttggactgttgaaactggggttcttcttgattcagaa
cttcccaatgagatcccagataacgagtatatcaagtatttttctccagactgctcgttg
aggattccaagtgggcatatagagaacctaaatagtaaatcgtatctcagcacgattaaa
atacaagtcttggaaaatctgcgttgcatccaacatgctcctagcgtacagatgcaagag
gttccacctgatttctatattccggactttgatgaagatgagcagaaccctgatgaacgt
ctgaatcagcacactcaagacaagaacattcagcgcgacgacgaatattatgaaggagac
aacgataacgatcacatggaagatatgtaa
DBGET
integrated database retrieval system