KEGG   Pyrus x bretschneideri (Chinese white pear): 103932134
Entry
103932134         CDS       T03446                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082  ATP-dependent chromatin remodeling
pxb03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103932134
   03083 Polycomb repressive complex
    103932134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pxb03036]
    103932134
Enzymes [BR:pxb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103932134
Chromosome and associated proteins [BR:pxb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103932134
   HDAC complexes
    Sin3A-HDAC complex
     103932134
    BRAF-HDAC complex
     103932134
    REST complex
     103932134
    SHIP complex
     103932134
    MiDAC complex
     103932134
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103932134
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103932134
  Chromatin remodeling factors
   NuRD complex
    103932134
SSDB
Motif
Pfam: Hist_deacetyl Plasmod_MYXSPDY
Other DBs
NCBI-GeneID: 103932134
NCBI-ProteinID: XP_009339956
LinkDB
Position
Unknown
AA seq 429 aa
MPSKDKIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEVGEREGKFYAINVPLKDGIDDASFSRLFNT
IISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWTVETGVLLDSELPNEIPDNEYIKYFSPDCSLRIPSGHIENLNSKSYLSTIK
IQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERLNQHTQDKNIQRDDEYYEGD
NDNDHMEDM
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgccttcaaaggataaaatcgcctatttttacgacggggatgtgggtagcgtctacttt
gggccgaaccaccccatgaaaccgcaccggctatgtatgacccatcatctcgtcctctcc
tatgatctccacaaaaagatggaaatttatcggccgcataaggcgtatccggtggagctt
gcgcaattccattcagctgactatgttgagtttctgcacaggattacgcccgacacccag
cacttgttctcgaatgaaatggcaagatataatcttggagaagattgccctgtatttgat
aacttatttgaattttgtcaaatttatgctgggggaacaatagatgctgcacgtaggttg
aacaataaactttgtgatattgctatcaattgggctggtggactacaccatgccaaaaag
tgtgaggcatccggattttgttacatcaatgacttggtcttggggatcttggagcttcta
aaacatcatgcccgagtattgtatattgacatagatgtgcatcacggtgatggtgtagaa
gaagctttctattttactgatagggtgatgactgttagctttcataagtttggggatttg
tttttcccaggaacaggtgatgttaaggaagtaggagaaagagaaggcaagttttatgcc
atcaatgtcccactaaaagatggaattgatgacgctagcttcagtagacttttcaatact
attatttccaaggttgttgagacatatctaccaggcgcgatagttctccagtgtggagca
gattctcttgctggagaccgtttgggctgcttcaatctctccattgatggtcatgctgaa
tgtgttaagtttgtgaagaaattcaatatacccttactggttacaggaggtgggggatac
acgaaagagaatgttgctcggtgttggactgttgaaactggggttcttcttgattcagaa
cttcccaatgagatcccagataacgagtatatcaagtatttttctccagactgctcgttg
aggattccaagtgggcatatagagaacctaaatagtaaatcgtatctcagcacgattaaa
atacaagtcttggaaaatctgcgttgcatccaacatgctcctagcgtacagatgcaagag
gttccacctgatttctatattccggactttgatgaagatgagcagaaccctgatgaacgt
ctgaatcagcacactcaagacaagaacattcagcgcgacgacgaatattatgaaggagac
aacgataacgatcacatggaagatatgtaa

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