Pyrus x bretschneideri (Chinese white pear): 103941870
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Entry
103941870 CDS
T03446
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103941870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103941870
Spliceosome [BR:
pxb03041
]
Complex A
U1 snRNP components
U1 related factors
103941870
Complex B
103941870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
103941870
NCBI-ProteinID:
XP_009350341
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MANNPQSSAGQPFRPPPVASMGPQSFGSSPLQYRPVVPTQQGQQFIPPASQQFQPVGQGI
PSPNVGMPGSQSQQLQYSQPMQPYPLRPSQPGHAHSSQALPMQYMQTRPTVPSQSQQPVP
PFNNQMPGMPYSSSYMFAPPTYVQQQNNVSSQFQPMSQVQAHIVSATGQPWVSSGNQGAA
VPSPVQQPGQQSSSTPSTDSAVSVPSQVQQSSSDWQEHMAADGRRYYFNRRTRESNWEKP
LELMTPMERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKLAREQAQRELIQGTH
SEMNLTSHTPPAVASAETSLGTSSVGPSTSSALPGMVPSPVAVTPVSSFSNPSPTAPTGS
SVASGAQSSITGAVGVQPPAVTVTPLPASVSGSTGVPPTSVNTTTNSVSTYETVASQDIA
SSADGILTQDIEEAKRGMAVAGKVNVTPSEEKTFDDEPLVYANKQEAKTAFKSLLESANV
QSDWTWEQTMREIINDKRYGGLKTLGERKQAFNEYLGQRKKLENEERRMRQKKAREEFTK
MLEESRELTSATRWSKAVSVFENDERFKAVERARDREDLYESYIVELERKEKQKAAEEHK
QNIVEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLVRLLIFQDYIRDLEKVEEE
QKKLQKEQLRREERKNRDEFRKLLEEHVADGTLTAKTLWRDYCTKVKDLPPYEAVALNAS
GSTPKELFDDVFEELEKQYHDDKARIKDAMKSGKVTMTSTLAFEEFKVPILEDIGSPPIS
DINFKLVYEELLERAKEKEEKETKKRQRHVDDFNNLLHTIKEITAASNWEDSKHLFEETQ
EYRSIGDGREVFEEYITSLQERAKEKERKREEEKAKKEKEREEKEKRKDKERKEKERERE
KEKGKDRSKKDETDSENVDITDSHGHKEDKKREKDKDRKHRKRHQSSIDDVGSDKEEKEE
SKKHRHSSDRKRSRKHTPESDSESRHRRHKREHRRSGEHVDLEDGELGEDGEIK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaccctcagtcctcagctgggcagccatttcgtcctcccccagttgcttcc
atgggtcctcaaagttttggttcatcccctcttcaataccgaccagtggttccaacacag
caaggacagcaatttattccaccagcttcccaacaatttcagcctgtgggacaaggtatt
ccttctccaaatgttgggatgcctggtagtcaaagtcagcaattacaatattctcaacca
atgcaaccgtatcctctcaggccaagtcaacctggtcatgctcattcatcacaggcgttg
cctatgcaatacatgcagacaaggcctactgtcccatctcagtctcagcaacctgtccca
ccttttaataatcagatgcctggaatgccttattcttcctcatatatgtttgctccgcct
acgtatgtccagcaacaaaataatgtcagttcacaatttcagccgatgtctcaagtgcaa
gcacacattgtatctgccacaggacagccttgggtgtcctctggtaatcagggtgcagca
gttccttcaccagtacagcagcctggccaacaatcttcaagcactccttccacagattct
gctgtaagtgttcctagccaagtacagcagtcttcttcagattggcaagagcatatggcg
gctgatggaagaagatattatttcaacagaagaacaagagaatctaattgggagaagcct
ttagagttgatgacaccgatggagagggccgatgcatcaactgtttggaaggagtatacg
tctgcagatgggaaaaagtattattacaacaaggttacaagggagtctaagtggacaatt
ccagaggagttaaagttggctcgcgaacaggctcaaagagaactaatccaaggaacacat
tcagaaatgaatttgacttctcatacccctcctgctgttgcttcagctgaaacatctttg
ggaacgagttcagttggccccagtacttcttcagccctacctgggatggtcccgagccct
gttgcagttacacctgtgtcttctttttctaatccttctcctaccgcacctactggatca
tcagttgcttctggtgcacagtcttccataacaggtgccgttggcgttcaacctcctgca
gtaactgtgactccactgcctgcttctgtttcagggagtaccggagttcctcctacttcg
gtcaacaccactacaaactcagtgagtacttatgaaactgtagcatctcaagatattgca
agttctgctgatggaattctgactcaagatatcgaggaagccaaaagaggtatggcagtt
gctggaaaagtcaatgtgactccttcagaggagaaaacatttgatgacgaaccactggtg
tatgccaataagcaggaggcaaaaactgctttcaaatcacttctggaatctgcaaatgtc
caatctgattggacttgggagcagacaatgagggagatcattaatgacaaaagatacggt
ggtttaaaaactctaggtgagaggaagcaagcatttaatgagtacttgggtcaaaggaaa
aaactggagaatgaagagaggcgcatgaggcagaaaaaagctcgggaagaattcacaaaa
atgttggaagagtccagggaacttacatcagcaaccagatggagcaaagctgtgagtgtg
tttgaaaatgatgaacgattcaaagctgtagaacgagctagagaccgggaagatctttat
gagagctacattgtagaactcgaaaggaaggaaaaacaaaaggcagctgaagagcataag
cagaatattgtagagtacaggaaatttctggaatcttgtgactttatcaaggtgaacagc
cagtggcggaaagttcaagatcgcttggaggatgacgagagatgcttgcgccttgaaaag
cttgttaggttgctcattttccaggactatattcgtgaccttgagaaggtggaagaggag
caaaaaaagttacagaaggaacaattgaggcgggaagagaggaaaaaccgcgatgagttc
cgcaagctattggaagaacatgttgctgatggcactcttacagctaaaactctctggcgc
gattactgtacgaaggttaaggacttgcctccatatgaagctgttgcattgaacgcctct
ggttcaacaccaaaagaattgtttgatgacgtttttgaagaattagagaaacagtatcat
gacgataaagctcggataaaggatgcaatgaagtcagggaaggttaccatgacttccaca
ttggcatttgaagagtttaaggttcctattctggaagatattggttccccaccaatatca
gacattaacttcaagcttgtgtatgaggaattattagagagagccaaggagaaggaggag
aaagagacaaagaagcgtcaacgacatgttgatgacttcaataacctattgcacacaatc
aaggaaataaccgctgcttctaattgggaagatagcaaacacctttttgaagaaacccaa
gaatacagatcaattggtgatggtagggaagtttttgaggagtatattacaagcttacag
gagagggctaaagagaaggaacgaaagcgtgaggaggaaaaggccaaaaaagagaaagaa
agagaagagaaagagaagcggaaggataaagagagaaaggagaaggaaagagaacgtgaa
aaagaaaagggaaaggaccgatctaagaaggatgaaacagatagtgaaaatgtagacata
actgatagtcatgggcataaagaagataagaagagggagaaagacaaagacagaaagcac
cggaagcggcatcaaagttccattgatgatgtaggttccgataaggaggagaaagaggag
tctaagaaacacagacatagtagtgaccgcaaaagatcaaggaaacatacacctgaatct
gacagtgaaagtcgtcatagaaggcataagagagagcatcgtcgaagtggtgaacatgtc
gaccttgaagatggggagcttggtgaagatggggaaattaagtaa
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