Pyrus x bretschneideri (Chinese white pear): 103948144
Help
Entry
103948144 CDS
T03446
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103948144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103948144
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103948144
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103948144
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103948144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
103948144
NCBI-ProteinID:
XP_009357416
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDSERLTLSRENPRVAFSPHTAGKAMPGAELAQKPQPPTPIVDRFRALLKQREEDLRVSP
DDVVSPPSTEEIVHLYEIVLSELIFNSKPIITDLTIIAGEQRDHGKGIANAICARILEVP
VEHKLPSLYLLDSIVKNIGREYAKFLSSRLPEVFCEAYRQVHPNQHPAMRHLFGTWSAVF
PPSVLRRIEEQLQFSPQANQQSSGLPPLRTSESPRPAHGIHVNPKYLRQLDSSDVDGVVS
QRFNSTGSVSHSPFALGSNQLHPSSTARLTRSSSPSNIGLDRSLPSAVDEYAAEQSPRRF
VERASPSNSVFDYRLGGAMGKDEESNEWRRKRYLDGSQKRFDTSAAYNGVDHPNPRALID
AYGKDSADRSLNDKPLLVGRLGLNGLDHKATPMSWQNTEEEEFDWEDMTPNLADHGQGND
FMASTVPPSRSYKASHGTQTASSLEPDVRSTWSSQAHPPSAEQSSIIAEDSVPPLRFGHG
SSGAVSRFQSEKNHNLGSRYPQEAWNMPFHHLQPLLNPLNAKGRGGNIQTPFVTSGISSG
GEKMSAFNDKLLDVDIRLHGPITSRMGSSSVYSVTADSRSVMPVSMGLRPPVNVHNSHPP
QVHSVFAMQNQRNLYGSINYSNTVKNQGPYNPLCMPEQQLDGYENKESRSTKSTQVPQYR
PLQPQYRSPQEARENIFSSAETQVPSYLGVPPLNHGYTLRGPIPRQHLGIPTPYNPNGSS
QFSLPPLPPGPPPSQDILSVQNPGSVVSSNQPGNAYSGLISSLMAQGLISLTNQSPVQDS
VGVEFNADLLKVRHESVISALYGDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRK
QKPSRKWFVNTSMWLTGAEALGTEAVPGFLPAETIVEKKSDEEMAVPADEDQNSCALCGE
TFDDFYSDENEEWMYKDAVYMNAPDGATGGMDRSQLGPIVHAKCRSESSVVSPEGFGQDQ
GGIIEEGSQRKRLRS
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggactcggaaaggctcacactttcccgagaaaaccctagagtcgctttttccccgcac
accgctggaaaggccatgcccggtgctgagttggctcagaagccccagcctccgactccg
atagtggaccgattcagggctctgctcaagcagcgggaggaggacctcagggtttcgccc
gacgacgtggtttcgccgcccagcaccgaagaaatcgtccatctttacgagatcgtattg
tcggagcttatctttaattcgaagcccatcattaccgatctcaccatcatcgccggcgaa
cagagagaccacggaaagggcatcgccaacgccatctgcgcccgcattctcgaggtcccg
gtcgagcataaactgccttcactgtatcttttagacagtattgtcaagaatattggccga
gaatatgccaagtttctctcttcccgtcttcctgaggtcttttgcgaggcatacaggcaa
gtacaccctaatcagcaccctgccatgcgccacctctttggcacttggtcagcagtattt
ccaccttcagtccttcgcaggatcgaagagcaactgcaattttctccgcaagcaaaccaa
caatcatcaggattaccacctttgaggacttctgaatctcctcgaccagctcatggcatc
catgtcaatccaaaatatttgcgtcagttggacagttcagatgtagatggtgttgtatcc
caaagatttaactcaacaggaagtgtgagtcattcaccttttgccctggggtccaatcaa
ttacacccatcttcaactgctaggcttacaagatcttcgtcgccttctaatattgggctt
gataggtctttgccatcagcagttgatgaatatgcagcagaacagtctccaagaaggttt
gttgagagggcttctccatctaattccgtgtttgattatagacttggtggagcaatgggt
aaagatgaggagtcgaatgaatggcggagaaaacgctatcttgatggtagtcagaagcgg
tttgatacttctgctgcatataatggagttgaccatccgaacccaagagctttaattgac
gcatatgggaaggacagtgcagatagaagtttaaatgataagcctctgctggttgggcgg
ctgggcctgaacggtctagatcataaggcaactccaatgtcatggcagaatactgaggag
gaagagtttgactgggaagatatgaccccaaatttagcagaccatggtcagggtaacgat
ttcatggcttcaactgtaccgccttctagaagctacaaggcaagccatggaacacagact
gcaagctccttggagccagatgttaggagtacttggtctagtcaggcacatccaccttca
gccgaacagtcctctattatagctgaagattcagttcccccacttcgttttggtcatgga
tcatcgggtgctgtgtctcgatttcagtctgagaaaaatcataatctgggttctcgctac
cctcaagaagcctggaatatgcctttccatcacttgcagcctttgctgaatccccttaat
gccaaaggaagaggagggaatattcagacgccctttgtgacaagcggtatatcttcaggt
ggtgagaaaatgtctgcttttaatgacaagcttctagatgttgatatacgacttcatggg
cccattacatcaagaatgggttcctctagtgtttactctgttactgctgactctcgatct
gtgatgccagtgtcaatgggtttaaggcctccagtaaacgtgcataattctcaccctccc
caagtgcactcagtttttgctatgcagaaccagaggaatctgtacggttcaataaattat
agcaatactgtaaaaaatcaaggcccatataatcctttatgcatgccggagcagcagtta
gatggctatgaaaacaaggagtcaagatcgacaaagtcaactcaggtgccacaatatcgt
cccttacaaccacagtatcgttcacctcaggaggcacgggagaatattttttcatctgca
gaaactcaggtgccatcttatttaggggtaccacccttaaatcacggatacactttgcga
ggtcccatacctcgtcaacacttgggcataccaaccccctataacccaaatggcagttcg
cagttctccttgccacctctaccaccaggtcctcctccctcgcaagacatactttccgtc
caaaaccctggttcagttgtctctagcaatcagcctggcaatgcctattctggtttgatt
agttctctcatggctcaaggtttgatctcattgacaaatcaaagccctgtccaggattct
gtaggagtcgaatttaatgccgaccttctcaaggtgcgtcatgaatctgtaataagtgcc
ctatatggtgatctccctagacaatgcacaacctgtggccttaggttcaagtgccaagaa
gagcacagtagtcatatggattggcatgtaacaaagaatcgcatgtctaaaaaccgcaag
cagaagccctctcgcaaatggtttgtaaatacaagtatgtggctcactggtgcagaggca
ttgggtactgaggcagtccctggatttttgcctgctgagaccatagtggaaaagaagagt
gatgaagaaatggctgttcctgccgatgaggatcagaattcgtgtgcattatgtggagag
acttttgatgacttttatagtgatgagaatgaagagtggatgtataaagatgctgtgtac
atgaatgcacctgacggagcaacaggaggcatggataggtcacaattaggtcctattgtg
catgctaaatgcagatccgagtcaagtgtggtctcccctgaaggttttggacaagatcaa
gggggaattattgaagagggtagtcaaagaaaacgattgcggagttaa
DBGET
integrated database retrieval system
