Pyrus x bretschneideri (Chinese white pear): 103949529
Help
Entry
103949529 CDS
T03446
Name
(RefSeq) histone deacetylase 19 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103949529
03083 Polycomb repressive complex
103949529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103949529
Enzymes [BR:
pxb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103949529
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103949529
HDAC complexes
Sin3A-HDAC complex
103949529
BRAF-HDAC complex
103949529
REST complex
103949529
SHIP complex
103949529
MiDAC complex
103949529
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103949529
Heterochromatin formation proteins
Other heterochromatin formation proteins
103949529
Chromatin remodeling factors
NuRD complex
103949529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
103949529
NCBI-ProteinID:
XP_018503527
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MDTGGNSLVSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPYPARDRDLCRFHADDYVAFLRNITPETQQDQLRQLQRVNVGEGRPVFDGLYSFCQT
YAGGSVGGAVKLNHGICDISINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHYLFKPIIGKVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGAEIEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHMLLEEIRSKLLENLSSLQHAPSVQFQERPPDTELPEENEEQDDPDERWDPDSDMEV
DDERKPLPSRVKKEIIEPEVKDPIQKGTSENARSSGYDPAVDEITTGAKALDMGSGSVDE
PPTVKVEQDTMNKPADQI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggcggcaactctctagtgtcgggtgccgacggagtgaagaggaaggtgagc
tatttctacgacccagaagtgggaaattactattatgggcagggacacccgatgaagccc
caccggattcggatgacccacgccctcctcgcgcactatggcctccttcagaacatgcag
gtcctcaaaccctacccagcccgcgaccgcgacctctgccgcttccacgccgacgattac
gtggcgttcctccggaacatcacccccgaaacgcagcaggaccagctgcggcagctccag
cgggtcaatgtcggcgagggccgccctgtctttgatgggttgtactcgttttgccagacc
tatgctggtgggtcggtcggcggcgctgtgaagctcaaccatgggatttgtgatatttcg
attaattgggccggtggtttgcaccatgctaagaagtgtgaggcttctgggttttgctat
gtgaatgacattgttcttgcaattttggaacttcttaagcagcatgagcgcgttttgtat
gtggacattgatatccaccatggagacggtgttgaggaggcattttacacgacggacagg
gtcatgacggtttcatttcacaagtttggggattattttcctggcacgggggacattcgt
gatattggttacgggaaagggaagtattactcccttaatgttccgttggatgacgggatt
gatgatgagagctaccattacttgttcaagcccatcattgggaaggtgatggaaattttt
aagcctggggctgtggttctccagtgtggtgctgattccttatctggggacaggcttggc
tgcttcaatctttccatcaaaggccatgccgagtgtgttagatatatgagatccttcaat
gtcccgctcttgcttctaggtggcggtggctataccattcgcaatgttgctcgttgttgg
tgctacgagacaggagtagcacttggagcagaaattgaggacaaaatgccacagcacgag
tattatgaatatttcggtccagattatactcttcatgttgccccgagtaatatggaaaat
aagaattctcacatgttgctagaagaaatacggtcaaagcttcttgaaaacctctccagt
ctgcagcatgcacccagtgtccagtttcaggaaagaccacctgatactgagcttccggag
gagaatgaggaacaggatgacccagacgagaggtgggatccagattctgatatggaggtt
gatgatgaacgtaagcctttaccaagcagagtaaagaaagagatcattgaacctgaagtt
aaagatccgatccagaaagggacctcggagaacgctagaagctcaggctatgatccagca
gtagatgagataacaacaggcgcaaaggctttggatatgggatctggatcagtggatgaa
ccaccaactgtgaaagttgaacaagacactatgaataagcctgcggaccagatataa
DBGET
integrated database retrieval system