KEGG   Pyrus x bretschneideri (Chinese white pear): 103949529
Entry
103949529         CDS       T03446                                 
Name
(RefSeq) histone deacetylase 19 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082  ATP-dependent chromatin remodeling
pxb03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103949529
   03083 Polycomb repressive complex
    103949529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pxb03036]
    103949529
Enzymes [BR:pxb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103949529
Chromosome and associated proteins [BR:pxb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103949529
   HDAC complexes
    Sin3A-HDAC complex
     103949529
    BRAF-HDAC complex
     103949529
    REST complex
     103949529
    SHIP complex
     103949529
    MiDAC complex
     103949529
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103949529
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103949529
  Chromatin remodeling factors
   NuRD complex
    103949529
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103949529
NCBI-ProteinID: XP_018503527
LinkDB
Position
Unknown
AA seq 498 aa
MDTGGNSLVSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPYPARDRDLCRFHADDYVAFLRNITPETQQDQLRQLQRVNVGEGRPVFDGLYSFCQT
YAGGSVGGAVKLNHGICDISINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHYLFKPIIGKVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGAEIEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHMLLEEIRSKLLENLSSLQHAPSVQFQERPPDTELPEENEEQDDPDERWDPDSDMEV
DDERKPLPSRVKKEIIEPEVKDPIQKGTSENARSSGYDPAVDEITTGAKALDMGSGSVDE
PPTVKVEQDTMNKPADQI
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggacaccggcggcaactctctagtgtcgggtgccgacggagtgaagaggaaggtgagc
tatttctacgacccagaagtgggaaattactattatgggcagggacacccgatgaagccc
caccggattcggatgacccacgccctcctcgcgcactatggcctccttcagaacatgcag
gtcctcaaaccctacccagcccgcgaccgcgacctctgccgcttccacgccgacgattac
gtggcgttcctccggaacatcacccccgaaacgcagcaggaccagctgcggcagctccag
cgggtcaatgtcggcgagggccgccctgtctttgatgggttgtactcgttttgccagacc
tatgctggtgggtcggtcggcggcgctgtgaagctcaaccatgggatttgtgatatttcg
attaattgggccggtggtttgcaccatgctaagaagtgtgaggcttctgggttttgctat
gtgaatgacattgttcttgcaattttggaacttcttaagcagcatgagcgcgttttgtat
gtggacattgatatccaccatggagacggtgttgaggaggcattttacacgacggacagg
gtcatgacggtttcatttcacaagtttggggattattttcctggcacgggggacattcgt
gatattggttacgggaaagggaagtattactcccttaatgttccgttggatgacgggatt
gatgatgagagctaccattacttgttcaagcccatcattgggaaggtgatggaaattttt
aagcctggggctgtggttctccagtgtggtgctgattccttatctggggacaggcttggc
tgcttcaatctttccatcaaaggccatgccgagtgtgttagatatatgagatccttcaat
gtcccgctcttgcttctaggtggcggtggctataccattcgcaatgttgctcgttgttgg
tgctacgagacaggagtagcacttggagcagaaattgaggacaaaatgccacagcacgag
tattatgaatatttcggtccagattatactcttcatgttgccccgagtaatatggaaaat
aagaattctcacatgttgctagaagaaatacggtcaaagcttcttgaaaacctctccagt
ctgcagcatgcacccagtgtccagtttcaggaaagaccacctgatactgagcttccggag
gagaatgaggaacaggatgacccagacgagaggtgggatccagattctgatatggaggtt
gatgatgaacgtaagcctttaccaagcagagtaaagaaagagatcattgaacctgaagtt
aaagatccgatccagaaagggacctcggagaacgctagaagctcaggctatgatccagca
gtagatgagataacaacaggcgcaaaggctttggatatgggatctggatcagtggatgaa
ccaccaactgtgaaagttgaacaagacactatgaataagcctgcggaccagatataa

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