Pyrus x bretschneideri (Chinese white pear): 103952336
Help
Entry
103952336 CDS
T03446
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103952336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103952336
03036 Chromosome and associated proteins [BR:
pxb03036
]
103952336
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103952336
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103952336
PBAF complex
103952336
GBAF(ncBAF) complex
103952336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103952336
NCBI-ProteinID:
XP_009362218
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MATKSAAQDLSSDDTPSKPPPTPLXXXXXXXXXXXXXXXPIPANPETPTTAAPRHPQPRP
TSDADVIHVPSYSSWFSPDHIHHCEVRFLPEFFDSRSPSKNPTLYKYYRNTIVAQSRAVN
PSRKLTFTEARKSLVGDVGSVRRVFDFLEAWGLINYTPSALNKPLKWEDKDSSKAAGVSS
NGGAESPAVGAKENPKKRTCNGCKSVCSIACFVSEKNDMTLCARCYVRGNYQIGISSSDF
RRVEINEEMGSGWADKDTLHLLEALMHYGDDWRKVAQHVGRSEKECVAHFLKIPFGEEFS
GEFSDNAGDAECALEGDGDGTTPSLSKRMRLTPLADASNPIMAQAAFLSALAGVQVAEAA
ASAAVTALCEADYETSKMSVTSLASNARQHETDAELNGDNKTDPDALGAAFVDANSQLEK
EGLDVGRAISGITEVQMREIRKKIIRFEALDLQMEKEWEQLEQMKSMLFVDQMTLLLNKS
SAPKTAAEEKNVKAD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaatcagcggcccaagacctctcctccgacgacaccccatccaaaccccca
cccactcctcttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttccg
atccccgccaatcccgagactccgaccaccgccgctccccgccatcctcaaccgcgtccc
acctccgacgccgacgtcatccacgtccccagctattccagctggttctcgccggaccac
atccaccactgcgaggtccgattcctccccgagttcttcgattctcgatccccttcgaaa
aaccctaccctctacaagtactaccgcaacaccatcgtcgcccaatccagggccgtcaac
ccctctcggaagctcaccttcacggaggcccgcaagtctctcgtgggcgacgtcggctcc
gttcggagggttttcgatttcctcgaggcgtggggtttgatcaattacactccttccgcg
ctcaacaagcccctcaagtgggaggacaaggacagcagcaaggccgccggtgtttcctct
aacggaggcgctgaatcccccgccgtcggtgccaaggagaaccccaagaaaaggacctgc
aatggctgcaagtctgtttgcagcattgcctgctttgtttccgaaaagaatgacatgact
ctatgtgcaaggtgctatgttcgcggaaactatcagatcggcataagttcttccgatttc
aggcgggttgagatcaatgaagagatggggagtggctgggctgataaagatactctgcat
cttctagaggcccttatgcattatggcgacgactggaggaaggttgcgcaacatgttggt
agaagcgagaaggaatgtgttgctcatttcctcaagattccattcggtgaggaattttct
ggcgagttttctgacaatgcaggtgatgctgaatgtgcgttggagggtgatggtgatggt
acaacaccgtctctaagtaaaagaatgcgtctcacgcctcttgcggatgcaagcaaccca
attatggctcaggcggcctttctgtcagctctggcgggcgtgcaggttgcagaggctgct
gcttctgctgctgtaacagcgctgtgtgaggcggattatgaaacaagcaaaatgagtgtt
acatctctggcttcgaatgcaagacagcatgaaactgatgctgaattaaacggagacaat
aaaactgacccggatgcgctgggggcagcttttgtagatgcaaattcacagcttgagaag
gaagggctggatgtgggacgagcaatctccgggattacagaggtacagatgagagaaatc
cgaaagaagatcatccgtttcgaggcgttggatttgcagatggagaaagagtgggaacaa
ctggagcaaatgaaaagcatgctctttgtcgatcagatgacacttttgttaaacaaaagt
tctgcaccaaaaactgcggcggaggagaagaatgtaaaggcggattga
DBGET
integrated database retrieval system
