Pyrus x bretschneideri (Chinese white pear): 103962424
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Entry
103962424 CDS
T03446
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103962424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103962424
03051 Proteasome [BR:
pxb03051
]
103962424
Membrane trafficking [BR:
pxb04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
103962424
Proteasome [BR:
pxb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103962424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
XPC-binding
Mod_r
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Dsc3_N
HOIP-UBA
Motif
Other DBs
NCBI-GeneID:
103962424
NCBI-ProteinID:
XP_009373398
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MGGEGDSSEPKVSGQGGEGGEQINIRCSNGSKFLVRASLDSTVGAFKEVLAQNCDIPADQ
QRLIYKGRILKDDQTLTSYGLQADHTVHMVRAFAAPASTPAPPAVNATSASPTTAPGVTR
GVGSTEREGLQTPDLGASLLFEQGLNPLGGGGGGQGLFGAGLPEFEQVQQQLTQNPNMMR
DIMNTPAIQSLMNNPDLMRGLIMNNPQMRDIIDRNPELAHVLNDPGILRQTLEAARNPEL
MREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTGNSGNDLGSNPFSALLGNQ
GGAQARDGSNNPSTTGSETPAGSVAPNTNPLPNPWGAAGGGNQPNTTRTNSVGDGRAAGI
AGLGGLGLPGMEQMLGGMPDANAMNQLLQNPAISQMMQSMLSNPQYMNQILNPQLRGMVD
SNPQLREMMQNPELLRQLTNPETMQQMLSLQQSLFSGNRQQPTQDPTLTGGATGAPNNTG
LEMLMNMFGGLGAGSLATANPNVPPEELYETQLRQLQEMGFFDTQENIRALQATSGNVHA
AVERLLGNPGA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggagggcgattccagcgagcctaaagtcagtggccaaggaggagaaggagga
gagcagattaacattcgatgctcgaatggttccaagtttttggtgagggcgagcctggac
tcgactgttggggcattcaaggaagttttggctcagaactgcgatattccagctgatcag
cagaggttgatttacaaaggtcgtattttgaaggacgaccagaccctcactagttatggt
ctgcaggcagatcatactgttcacatggtccgtgcctttgctgcacctgcatcaaccccc
gctcctcctgctgttaatgctacttctgctagtcctacaactgctccaggtgttactcgc
ggtgttggttccactgagcgtgagggacttcagactcccgatcttggggcatctttgttg
tttgagcagggtttaaacccacttggtggtggtggtggaggacaggggttatttggagct
ggtcttccggaatttgaacaagtgcagcagcaactgactcagaacccgaacatgatgagg
gacataatgaacacgcctgccattcagagtttgatgaataaccctgatttgatgcgtggc
ttgattatgaacaatccgcaaatgcgtgatatcattgaccggaacccagagcttgcacat
gtacttaatgatcctggcattctccgacagacattggaagctgcaaggaaccctgaactc
atgcgtgagatgatgcgaaacactgacagggcaatgagtaacattgaatcttcccctgag
ggattcaacatgctgaggcggatgtatgaaaacgttcaggagccatttttgaatgctaca
accgggaattctggaaatgatttgggttcaaatccattttctgctcttttgggcaaccag
ggtggggcacaggcccgggatgggtctaacaacccttcaaccactggctcagaaacacct
gcaggttctgttgcacctaatacaaacccacttcctaacccttggggcgctgctggtgga
ggaaatcagccaaatactaccaggacaaattctgttggggatggaagggcagccggtatt
gctggcctgggaggtcttggtctccccggaatggaacagatgcttggtggcatgccagat
gctaatgcaatgaatcagcttttgcagaatccagcgatatcacaaatgatgcagagcatg
ctttccaatccccagtacatgaatcagattctgaatccacaactacgcggaatggttgat
tcaaatcctcaacttagagaaatgatgcaaaatccagagctactgcggcagttaacaaac
cctgaaacaatgcagcaaatgctctcgttacagcagtcgctattttcaggcaatcgacag
caaccaactcaggatccaactctcaccggtggtgctacaggtgcccccaataatactggg
ttggagatgctgatgaacatgtttggaggtcttggagccggcagcttggccactgcaaac
cctaatgtaccaccggaagagctgtatgaaactcagctaaggcagcttcaagaaatgggt
ttcttcgatacccaagagaatatcagggcattgcaagccacttctgggaacgtccacgct
gcggtggagcgacttttagggaatcccggggcgtaa
DBGET
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