Pyrus x bretschneideri (Chinese white pear): 103967093
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Entry
103967093 CDS
T03446
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103967093
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pxb01002
]
103967093
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103967093
Enzymes [BR:
pxb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103967093
Peptidases and inhibitors [BR:
pxb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103967093
Ubiquitin system [BR:
pxb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103967093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
103967093
NCBI-ProteinID:
XP_009378613
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MTVMTPAPIDQPEDEEMLVPHSDLPENNHQPMEVVAQPETANNVENQPVEDPPSSRFTWR
IDNFTRMNTKKHYSDAFVVGGYKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGWSRYAQF
SLGVINQMHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTIIVEAEVL
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSQ
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
IKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDRDKIICNVDEKDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDENLMEQIGKDIYFDIVDHDKVRSFRI
QKQTPFNIFKEDVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPMEETQSVGQLREVSN
KVHNAELKLFLEVELGPDLHHIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKA
AEILSKLNEMAGYDPEEEIDLYEEIKFEPTVMCEPIDKKFIFRACQLEDGDIVCFQKPTS
VESEHLRYPDVPSFLEYVRNRQVVHFRSLEKPKEDDFSLELSKLHTYDDVVERVAQQLGL
DDPSKLRLTPHNCYSQQPKPQPIKYRGVDHLTDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHLATKEEVVVHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIYK
VFPHSEKIENINDQYWTLRAEEVPEEEKNLGPNDRVIHVYHFTKDTAQNQMQIQNFGEPF
FLVIHERETLAEVKARVQKKLQVADEEFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVY
GAWEQYLGLEHCDSAPKRSYAANQNRHTFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcatgacgcctgcccctattgatcaaccagaggacgaggagatgcttgtcccg
cattcggatttgcccgaaaacaatcaccagcccatggaagttgttgcacaacctgaaact
gctaataatgtggagaaccagccagtggaggatcctccatcatcaagattcacatggaga
attgacaactttactaggatgaatacaaagaagcattattccgatgcatttgttgttggc
ggctacaaatggcgcgtgcttatttttccaaagggaaataatgtggatcatttgtctatg
tatttggatgttgcggattcttcaagtttgccatatgggtggagtagatatgcacaattt
agcttgggggttatcaatcaaatgcataacaagtattcagtacgaaaagacacacaacat
cagttcaatgcgcgagaaagtgattggggttttacatcctttatgcctctcagtgaactt
tacgatcccagtagagggtatcttgtaaatgatacgattatagttgaagccgaggttctc
gttcgtagggttgtagattactggacatatgactcaaaaaaggagacaggttatgtgggg
cttaagaaccaaggagcaacgtgctacatgaactccctcctccagactctgtatcatatt
ccttatttcagaaaggctgtttaccatatgcccacaactgagaatgatttgccatcgcaa
agcataccattggctcttcagagtctattttacaagctccagtacagtgacaacagtgtg
gcaaccaaagagctgacaaagtcttttggatgggacacatatgattcatttatgcagcat
gatgtacaagaactcaatagagttttgtgtgaaaaacttgaggataaaatgaagggaact
gttgtagagggaactatacagaagttatttgaaggacaccatatgaactacattgaatgt
atcaacgtggactacaaatctacaagaaaggaatcattttatgaccttcagcttgacgtc
aaaggctgtcgtgatgtttatgcttcttttgataagtatgttgaagtggaacgtcttgag
ggtgataacaaatatcatgctgaacagtatggattacaggatgccaagaaaggtgttctg
ttcattgacttcccccctgtgcttcaacttcagctgaaacgatttgagtacgacttcatg
cgggacacaatggtgaagattaatgatcgttatgagttcccgttgcaacttgaccttgat
cgagagaatggaaaatatttatcacctgaagctgataggagcgttcgcaacctttacaca
cttcacagtgttttggtgcatagtggtggggtgcacggtggacactattatgcctttatc
aggccaacactttctgatcagtggtataaatttgacgatgagagggtaacaaaagaagat
ataaagagggcactagaggagcagtatggtggtgaggaagagttaccgcagacaaaccct
ggatttaataatactcctttcaaattcacgaaatattcaaatgcatacatgctggtgtac
atacgggaaagtgacagagataaaataatctgcaatgtggatgaaaaggacattgctgaa
catctgagggagagattaaagaaggaacaagaagaaaaggagcacaagaagaaagaaaag
gcagaagcacacctgtacactgttataaaggttgctcgggatgagaacctcatggagcaa
attgggaaagatatttattttgatattgtggatcatgacaaagttagaagttttcgtatt
cagaagcagaccccttttaacatttttaaggaggacgttgcaaaagagtttggcatacca
gtgcaatttcagcgtttttggctgtgggcaaagcgtcaaaaccatacatatcgtcctaac
cgtccgttgacgcctatggaggaaacacaatctgttggacagttgagggaggtatcaaac
aaggttcataatgcagaactaaagttattcttagaagtagagcttgggccggatttacac
catattgctccacctgacaaaacaaaggatgatatcctgcttttctttaagctttatgat
ccagaaaaagaagaactgcgatatgttggaagactttttgtgaagagtactggtaaggca
gctgaaatcttgtcaaaattaaatgaaatggctggctatgatcccgaggaagagattgac
ctatatgaggaaatcaagtttgagcccactgtcatgtgtgaacccattgataagaaattc
atatttcgagcctgccagcttgaggatggagacattgtctgctttcagaagccaacttca
gttgaaagtgaacatctccgctatcctgatgtcccatcttttctggaatatgtgcgcaac
cgtcaagttgttcacttccgatcccttgagaaacccaaggaagatgatttctccctagaa
ctgtcaaaacttcatacctatgatgatgttgtggaacgagtagctcaacaacttggtttg
gacgatccatccaaacttaggcttacaccacacaactgttactcacaacaacccaaaccc
cagccaattaagtatcgtggggttgaccacttgactgatatgctggtccactacaatcag
acttcagatatactgtactatgaagtgttggacatccctctgcctgaattacaaggtttg
aaaactctgaaagttgcattccatcttgctactaaggaagaagtggttgttcacaccata
agactgccaaaacagagcactgtgggggatgtaattaatgatcttaaaactaaggttgaa
ttgtctcatccggatgcagaacttaggctgcttgaagttttctatcacaagatttacaag
gtttttcctcacagtgaaaagattgagaacataaacgatcaatactggacattgcgagct
gaagaggttcctgaggaagagaaaaatcttggtcctaatgatcgtgtaattcatgtgtac
catttcactaaagacacagctcagaaccaaatgcaaattcaaaactttggggaacctttt
ttcttggtcatacatgaacgtgaaactttggctgaagttaaagctcgagtgcaaaagaaa
ttacaggttgcagatgaggagtttgctaagtggaagtttgcgtttctttccttaggtcgc
ccagaatatcttcaggactcggatattgtgtctagtcgatttcagagaagagatgtctac
ggtgcttgggagcaatatcttgggctggagcactgtgacagtgctcctaaaagatcttat
gcagctaatcagaatcgtcatacgtttgaaaagccagtaaaaatttacaactag
DBGET
integrated database retrieval system
