KEGG   Papilio xuthus (Asian swallowtail): 106116122
Entry
106116122         CDS       T07456                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pxu  Papilio xuthus (Asian swallowtail)
Pathway
pxu03030  DNA replication
pxu03410  Base excision repair
pxu03420  Nucleotide excision repair
pxu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pxu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106116122
   03410 Base excision repair
    106116122
   03420 Nucleotide excision repair
    106116122
   03430 Mismatch repair
    106116122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pxu03032]
    106116122
   03400 DNA repair and recombination proteins [BR:pxu03400]
    106116122
Enzymes [BR:pxu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106116122
    6.5.1.6  DNA ligase (ATP or NAD+)
     106116122
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     106116122
DNA replication proteins [BR:pxu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    106116122
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     106116122
DNA repair and recombination proteins [BR:pxu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     106116122
   NER (nucleotide excision repair)
    Other NER factors
     106116122
   MMR (mismatch excision repair)
    Other MMR factors
     106116122
SSDB
Motif
Pfam: DNA_ligase_A_N DNA_ligase_A_M DNA_ligase_A_C
Other DBs
NCBI-GeneID: 106116122
NCBI-ProteinID: XP_013165316
LinkDB
Position
Unknown
AA seq 908 aa
MNVSKLFRLSRIANCLVNRHHKILHTVVVKSWNVDTRRMSQKSITSFFKITPKKESDGNV
DRQKEDKSSADKSLTEDTSSSAAATKRSSKRLRSESVENEQPCASRSPSPVTSTKKKKVK
RQRIESSGSEADLSKGSDEETIPVKLERNDSPKTYSSPKTKRNKSKLTKSNQDNVKTIEY
NESCNQYDSPNEKSPKENKSPKSVKTPKKQRSPKERSESPEEKPKIKTEKKSPSPAKSAT
KAKGPMEKFMESNNMMRSFVKREKIVSSQDDVVAVHTMDASTHTLLPEVEYNPGKAKYHP
VKDACWTAGQPVPYLALARTLEAVEATSARLKMVDILSNYFRSVIALTPQDLLPSIYLCL
NQLGPAYLGLELGVAETYLMKAVGGCTGRSLAQVRAAAQRLGELGAAAQQARAAQRMLCA
PAPLQVRKLHAALKDLAAITGQASVNKKISKIQALFVACRHSEAKYLIRSLEGKLRVGLA
EQSLLQALALAAARTPPAGPHASCLDRADTMSSDDFKAVVEEHALVIKTTYCECPNYELV
VPALLQHGALELPRHCRLTPGIPLKPMLAHPARGVHEIFSRFENEKFTCEWKYDGERAQI
HVPGEEAPRLADARIFSRNQEDNTTVLSTRKRKDASAAEVRVQVCVFVFDLLLLNARALC
REPLAERRRLLREHFVESPGTWEFARAQDCSGAEEVQHFLELSVRGSCEGLMVKALHGER
AHYDIARRSRNWLKLKKDYLEGGGDSIDAVVIGAYRGRGRRAGRFGGFLLACYDPAGERY
QTLCKIGTGFSDRDLDAFTEQLQRHVIDAPRNYYSYETSQAPDVWVEATCVWEVRCADLS
LSPAHRAALGLIDRDKGVSLRFPRFVRVREDKRAEEATSAEQIARMYLAQDSVRNNHTAH
NMDDDDFY
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgaacgtatcgaagttgtttagattaagtagaatagctaattgtctcgtgaaccggcac
cataagattttgcataccgtagttgttaaatcgtggaatgtcgacacacgaagaatgtct
caaaaaagcataacctcgttttttaaaataacacccaagaaggagtctgatggaaatgtt
gaccgtcagaaggaggacaagtcaagtgcggacaaaagtttgacagaagacacatcatcg
tctgcagctgctacaaagagatcatcaaagagattgagatcagagagtgttgaaaatgag
cagccgtgtgcgtcccggtctccctcccccgtcacctcaacaaagaaaaagaaagttaaa
agacagagaattgagagctcgggaagtgaagcggatttaagtaaaggttcagatgaggaa
acaattcctgttaaattggaaagaaatgattcaccaaaaacttattcctcacctaaaact
aaacgcaacaaatcaaaattaacgaaaagcaatcaggataatgttaaaactattgagtat
aatgagagctgcaatcaatacgacagtccaaatgagaagagccctaaagaaaacaaaagt
ccaaaatcagttaaaactcctaaaaaacagagaagtcctaaggaacgatcagaaagtcca
gaagagaaaccaaaaattaagactgaaaagaaatcaccttcgccagcaaagagcgcaaca
aaagcaaaaggtccaatggaaaagtttatggaaagtaacaacatgatgcggtcttttgtg
aagagagagaagattgtcagctcacaagatgatgtggtggcagtacacacaatggatgca
agtacacatacattacttccagaagtggaatacaatccgggcaaggccaagtatcatccc
gtgaaggatgcttgctggaccgcgggccagcccgtgccgtacctcgccctcgcccgcacg
ctggaggccgtggaggccacctcggcgcgtctcaagatggtcgacatcctcagcaactac
ttccgctccgtcatcgcgctcaccccgcaggacctgctgcccagcatctacctctgcctc
aaccagctcggccccgcttatctaggactggagctaggcgtcgcggagacgtacctgatg
aaggccgtgggcgggtgcaccgggcggtcgctggcgcaggttcgtgcggctgctcagcgg
ctgggcgagctgggcgcggcggcgcagcaggcccgtgcggcgcagcgcatgctgtgcgcg
cccgccccgctgcaggtgcgcaagctgcacgccgccctcaaggacctcgccgccatcacg
ggacaggcgtccgtcaacaagaagatcagcaagatccaggcgctgttcgtggcgtgtcgc
cactccgaggccaagtatttgataaggtcgctggagggcaagctgcgcgtgggcctggcg
gagcagtcgctgctgcaggcgctggcgctggcggccgcgcgcaccccgcccgccggaccg
cacgcctcctgcctcgaccgcgccgacaccatgtcgtccgatgacttcaaggcggtggtg
gaggagcacgcgctggtgataaagacgacgtactgcgagtgccccaactacgagctggtg
gtcccggcgctgctgcagcacggcgcgcttgagctgccccggcactgtcgcctcacgccc
ggcatcccgctgaagcccatgctggcgcaccccgcgcgcggcgtgcacgagatattctca
cgcttcgagaatgagaagttcacgtgcgagtggaagtacgacggcgagcgcgcgcagata
cacgtgcccggggaggaggcgccgcgcctcgccgacgcccgcatcttcagccgcaaccag
gaggacaacaccacggtgctgtcgacacgcaagcgcaaggacgcgagcgcggcggaggtg
cgcgtgcaggtgtgcgtgttcgtgttcgacctgctgctgctgaacgcgcgcgcgctgtgc
cgcgagccgctggcggagcgccgccggctgctgcgcgagcacttcgtcgagagccccggc
acgtgggagttcgcgcgcgcgcaggactgcagcggcgcggaggaggtgcagcactttctg
gagctgtcggtgcgaggctcctgcgaggggctcatggtgaaggcgctgcacggcgagcgc
gcgcactacgacatcgcgcgccgctcccgcaactggctgaagctgaagaaggactacctg
gagggcggcggggacagcatcgacgcggtggtgatcggcgcgtaccgcggacgcggccgg
cgagccgggcgcttcggcggcttcctgctggcgtgctacgaccccgccggcgagcgctac
cagaccctctgcaagatcggcaccggcttctccgaccgagacctcgacgccttcaccgag
cagctgcagcggcacgtgatcgacgcgcccaggaactactacagctacgagacgtcgcag
gcgccggacgtgtgggtggaggcgacgtgcgtgtgggaggtgcggtgcgcggacctgtcc
ctgtcgcccgcacaccgcgccgcgctcggactcatcgaccgggacaagggcgtctcgctg
cgcttccccaggttcgtgcgcgtgcgcgaggacaagcgcgcggaggaggcgacgagcgcg
gagcagatagcgcgcatgtacctggcgcaggactcggtgcgcaacaaccacaccgcacac
aacatggacgacgacgacttctactga

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