Papilio xuthus (Asian swallowtail): 106126795
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Entry
106126795 CDS
T07456
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106126795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106126795
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106126795
Spliceosome [BR:
pxu03041
]
Complex A
U2 snRNP components
U2 related factors
106126795
Complex B
106126795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
106126795
NCBI-ProteinID:
XP_013180110
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MVRSGRDRDRDRDRRRSHSRSASPDRKRRRSRSRSRDRNSKSSKRKRSRSRDRDSKRDRS
RDRDRDRKSDKRDDKRNGSKSSRRKSPDKDRKDRSKSKEKSVKTESGDYNLGTVDKEAEQ
TRLEAEMQKRRDRIERWRAERKRKELESAKKEVQKGSLVTNIQAPSTKKWSLEDDSGDEG
EDGEGKEKQIIEEKKEEEDEIDPLDAYMQEVQQEVRKVNQMDQSRGLLSVPTAGGGTGVV
ILTGTAKKKVVEQKNKGELIEQNQDGLEYSSEEETEDIKDAAATLASKQRKELAKVDHAS
LHYMPYRKAFYTEVSELSRMTPEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGISKKEMD
ILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPALEDTDG
PISLIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAELKRGAEMIVCTPGR
MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSATFPR
QMEALARRILQKPIEIQVGGRSVVCKEVEQHVAILEEEAKFFKLLELLGLYSQMGSIIVF
VDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKSGKVRLLVATSVAARGLDV
KQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLTPEQGRYAGDVLRAFELAGTAP
PAELRQLWDRYKDAQEKDGKKVHTGGGFSGKGFKFDESEAQAATEKKKYQKAALGLQDSD
DEDVEGDLDQHIETMLAAKKIVKEIKPGVVGAGVPGAAVPGAADGKLELARRLASRINIA
KGLGAEHKGATQQAAEAILKGSPSTHTLITAKTVAEQLAAKLNTRLNYQPRDESNADSAE
EVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPTGKPPPEGERKL
YLAIESSQELAVAKAKSEITRLIKEELLKLQSSAHHMINKARYKVI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggttagaagcgggcgagatcgtgatagagaccgcgatcggaggcgttctcacagccgt
tcagcttcacctgatcgtaaacggagacgctcacgatcacggagtagagatcgcaattca
aagtcatctaaaaggaaacgtagccgtagcagagacagggactccaaaagagaccgaagc
agagacagagaccgtgatagaaagagtgacaagagggatgacaaaagaaatggaagtaag
tcatcaaggagaaagtcacccgacaaagacagaaaggataggtcaaaatccaaagaaaaa
tctgtcaaaacagaatctggagattataatctgggcacagttgataaggaggcagaacag
actcgtttagaagctgaaatgcagaagcgacgagacaggattgagcgttggcgtgcggaa
cgaaaacgtaaagagttggaatctgcaaagaaagaagtgcagaaaggtagcttagtgacc
aacatccaagcaccaagtacaaagaaatggtcgctagaagatgattctggtgacgaaggt
gaagatggagaaggaaaagagaaacaaatcattgaagagaaaaaagaagaagaagatgaa
atagatccgttagatgcttatatgcaggaagttcaacaagaagttcgtaaagtcaatcaa
atggaccagtcacgaggccttttaagtgttccgactgctggaggaggcactggtgtggtt
attttaacggggactgctaaaaagaaagtggtggaacaaaagaataaaggtgaattaatc
gaacagaatcaggatgggttggaatattcatcagaggaagaaacggaggatataaaagac
gcagcggccacacttgcctcaaaacagcgaaaggaactggctaaagtagatcatgccagt
ttacactatatgccgtacaggaaagcattttatactgaggtaagtgagttatccagaatg
actcctgaagaagtagaagcatatagaacagagttagaaggtataagagttaagggcaag
ggttgtccgaaaccgattaggacatgggcacactgtggtattagcaagaaggaaatggat
atactaaagaaattaaactttgaaaaacccacaccaatacaagctcaagcgataccggct
attatgtctgggagagatttaataggtattgctaagactggatcaggtaaaactttggcg
tttatcttaccaatgttccgacatgtactggaccagccagcactggaagacacggatgga
ccaatatcactcatcatgacccccactagagagctgtgtatgcagatcggcaaagatata
aagaaatttgccaaatctttaggactgagagttgtttgtgtttacggtggtactggaatt
tctgaacagatagcggagttaaagcgtggtgcagagatgatagtgtgtactccgggacgt
atgatcgacatgttggcggctaactcgggccgcgtcacaaacttgcgtcgcgtcacatac
gttgtactcgacgaggcagaccgcatgtttgatatgggatttgaaccacaagtaatgaag
ataatagacaacatacgtccggacagacagacggtgatgttcagtgctaccttcccgcgt
cagatggaggcgctcgcacgacggatactgcagaaacctattgagatacaggtcggcggc
agaagcgtagtctgcaaggaggtggaacagcacgtggctatattagaagaagaggcgaag
ttcttcaaacttctcgaactgctcggcctgtacagtcagatgggcagcatcatcgtgttt
gtggacaagcaggagaacgctgacagtctgctcaaagatctcatgaaggcttcctattcc
tgtatgagcttgcatggaggcattgatcaattcgacagggattccacaatagttgacttc
aagtcgggcaaggtgcggctgctggtcgccaccagcgtcgcggcgcgcggcctcgatgtc
aaacagctcgtcttagttgttaactacgactgtcccaatcattatgaggattatgtgcac
agatgcggtcgcaccggtcgcgcgggcaacaaggggtacgcgtggacgttcctgacgccg
gagcagggcaggtacgcgggcgacgtgctgcgcgccttcgagctggccggcaccgccccg
cccgctgagctgcgccagctctgggacaggtacaaggacgcgcaggagaaggacggcaag
aaggtccatactggaggagggttcagtgggaaaggcttcaagttcgacgagtctgaggcg
caggcggcgacagaaaagaagaagtaccagaaggcggcgctggggctgcaggactcagac
gacgaagacgtggagggagacctggaccagcacatcgagactatgctcgctgccaagaag
atcgtcaaggagatcaagccgggcgtggtgggcgcgggtgtgccgggtgcggctgttccg
ggcgcggcggacggcaagctggagctggcgcgccggctggcctcgcgcatcaacatcgcc
aaggggctcggcgcagagcacaagggcgctacacagcaggccgctgaggccatacttaaa
ggatctccttctactcacaccctcatcactgcgaagactgtggctgaacagttagctgct
aaactgaacaccaggctgaactaccagccgcgcgacgagagcaacgcggattcagcggag
gaggtgttccggaagtatgagacggagctcgagatcaacgacttcccgcagcaggcgcgc
tggcgggtcaccagcaaggaggcgctagcgttgatcagtgaatattcagaggcgggtata
acagtgcgcggtacatacgtgccgacggggaaaccaccaccggaaggcgagaggaaatta
tacctcgcaatagaaagctcccaggaacttgccgtcgctaaagccaagtctgaaataaca
agactcatcaaagaggaactactcaaactgcagtcatcagcacaccacatgatcaacaaa
gcgagatacaaagttatatag
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