Plutella xylostella (diamondback moth): 105384029
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Entry
105384029 CDS
T03915
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03022
Basal transcription factors
pxy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105384029
09124 Replication and repair
03420 Nucleotide excision repair
105384029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxy03021
]
105384029
03400 DNA repair and recombination proteins [BR:
pxy03400
]
105384029
Transcription machinery [BR:
pxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105384029
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105384029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105384029
NCBI-ProteinID:
XP_011552483
LinkDB
All DBs
Position
Un
AA seq
479 aa
AA seq
DB search
MAGESSKSSKSQNLNPSPTLQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARH
FVIRLLFVEQPVPQAVVASWVSQAHAKEQNKSCETLSELSVWQEAPIPGGLPGWILSQSF
KKNLKVALLGGGRPWSASSSLEPDGRARDVSFLDAYALERWQCVLHYMVGSAQTEGISAD
AVRILLHAKLMTRDAEDGSAVITRAGFQFLLLSTPKQVWLFLQHYLHTAEKRSLSAAECL
AFLYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNITCVR
DGAASVAPLAEQAKGYILVETNYRVYAYSQSTLQVALLGLFTELIYRFPNLVVGVLTRES
VRLALRGGITAQQIIHYLDQHAHPQMLNSETGGIRSSSLLPPTVVDQIKLWESERNRFTY
TEGVVYNQFLSQADFAVLRDYAKSAGVLTWQNERSRTMVVTRAGHDDVKKFWKRYSKSS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctggggaatcatcgaagtcgtctaaatctcagaacttgaacccatcaccaacactt
cagtgtaaagatcttcatgaatatctgaaaagccggtcgccgcaattcttggaaacattg
tataactatccaacgatatgtttggctgtttatcgggagctgccggagctggcgcggcac
ttcgtgatccggctgctgttcgtggagcagcccgtgccgcaagccgttgtcgcctcctgg
gtctcgcaggcgcacgccaaagagcagaacaagtcatgtgagacgctgtcggagctgtcg
gtgtggcaggaggcgcccatccccggcgggctgcccggctggatcctctcacagtccttc
aagaagaacttgaaagtggcccttctaggaggtggtcgtccctggtcggcctcctccagc
ctggagccggacgggcgcgcgcgcgacgtgtccttcctcgacgcgtacgcgctggagcgc
tggcagtgcgtgctgcactacatggtggggtccgcgcagaccgagggcatcagtgctgat
gcggtcaggatactgttgcacgccaagcttatgactagagacgcggaggacggctccgcg
gtgatcacgcgcgccggtttccagttcctgctgctcagcactccgaaacaggtgtggttg
ttcctccaacactacctgcacacggcggagaagcgcagcctgagcgcggccgagtgcctc
gccttcctctaccagctcagcttcagcactctggggaaggattacagcacggagggtatg
agcaacaacatgctggtgttcctgcaacacttgcgagagttcggcctcgtgtaccagaga
aagcgtaaagcgggtcgcttctacccgacgcgcctcgccctcaacatcacgtgcgtgcgc
gacggcgccgcgtccgtggcgcccctcgccgagcaggccaaggggtacatactggtggag
actaactacagggtgtacgcgtattcacagtcgacgctgcaggtggcgctgctgggactc
ttcacagaacttatctacagattccccaacctagtggtgggtgtcctgacccgcgagtcg
gtgcggctggcgctgcgcggcggcatcacggcgcagcagatcatacactatctggaccag
cacgcgcacccacagatgctgaactcggagacgggcggcatccgctcctcgtccctgctg
ccccccaccgtggtggaccagatcaagctgtgggagagcgagaggaatagattcacctac
actgagggagtggtctacaaccagttcctgtcgcaggcggacttcgcagtgctgcgcgac
tacgccaaatcagccggcgtgctgacgtggcagaacgagcgctcgcgaaccatggtcgtc
accagagcagggcacgacgacgtcaagaagttctggaaacggtactctaagagctcctga
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integrated database retrieval system
