Paracoccus yeei: A6J80_06030
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Entry
A6J80_06030 CDS
T04781
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pye
Paracoccus yeei
Pathway
pye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6J80_06030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pye03019
]
A6J80_06030
Enzymes [BR:
pye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6J80_06030
Messenger RNA biogenesis [BR:
pye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6J80_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DEDD_Tnp_IS110
CMS1
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ARC35999
UniProt:
A0A1V0GQN3
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All DBs
Position
727359..728795
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AA seq
478 aa
AA seq
DB search
MTQETARPARSGKPQPRGADARPRGQGGKPAFRDAKPPVNHRRHRDEPEEKFIRRAIPDI
DTPFTRMGIDARVAVNLPPMGIDAPSPIQEKSIPGIVEGRDLLGLAQTGTGKTAAFGLPM
LTRLLNIGRKPEPRTCRALILAPTRELATQIAANIDAYAAGTAIRQFRVVGGASINTQTM
RMERGVDVLIATPGRLIDLIERGAVDLSQTKYLVLDEADQMLDIGFIHALRRIAKMLPRE
RQTLLFSATMPKLMEELADSYLTDPLKVAVNPPGQAAAKIEQGVHFVNQGDKATLLAEYL
GKHRDELAIVFGRTKHGSEKLSKLLEKWGFKVAAIHGNKSQGQRERALAGFRSGDTKVLV
ATDVAARGLDIPEVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIALCAPAEIGELRAI
EKAMKASIPVVGGEVPFEAARMRERGGPVGRGAPSGQQPARKRPARRPSRAPKAAQRD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagaaaccgctcgcccggcccgttcgggcaaaccgcaaccccgtggtgccgac
gcccgcccgcgtggccagggcggcaagcccgccttccgcgacgccaagcccccggtcaac
catcgccgccaccgcgacgagcccgaggagaaattcatccgccgggccatcccggacatc
gacacccccttcacccgcatgggcatcgacgcccgcgtggcggtgaacctgccgccgatg
ggcatcgacgccccctcgccgatccaggaaaaatccatccccggcatcgtcgagggccgc
gacctgctgggccttgcccagaccggcaccggcaagacggcggccttcggtctgccgatg
ctgacgcgcctgctgaacatcggccgcaagcccgagccgcggacctgccgcgcgctgatc
ctggcgccgacccgcgaactggcgacccagatcgccgccaacattgacgcctatgccgct
ggcaccgccatccggcagttccgcgtcgtcggcggcgcctcgatcaatacccagaccatg
cgcatggagcgcggtgtggacgtgctgatcgcgacgcccggccggctgatcgacctgatc
gagcgcggcgcggtcgacctgtcgcagaccaaatacctggtgctggacgaggccgaccag
atgctggacatcggtttcatccacgcgctgcgccgcatcgccaagatgctgccgcgcgaa
cgccagacgctgctgttctcggccaccatgcccaagcttatggaagagctggccgacagc
tacctgaccgaccccctgaaggtcgcggtgaacccgcccggacaggcggccgccaagatc
gaacagggcgtgcatttcgtgaatcagggcgacaaggcgacgctgctggcggaatacctc
ggcaagcaccgcgacgaactggcgatcgtcttcggccgcaccaagcacggctcggaaaag
ctgtcgaagctgcttgagaagtggggcttcaaggtcgcggcgatccacggcaacaaatcg
cagggccagcgggaacgcgcgctggcaggtttccgcagcggcgacaccaaggtgctggtg
gcgaccgacgtggcggcgcggggcctcgatatccccgaagtggcgcatgtctataactac
gacctgcccaacgtgccggaaaactatgtccaccgcatcggccgcaccgcgcgcgccggc
cgcgacggccgcgccatcgcgctgtgcgccccggccgagatcggcgaattgcgcgccatc
gaaaaggcgatgaaagcctcgatccccgtggtcggcggcgaggtgcccttcgaggcggcc
aggatgcgcgaacgcggcggccccgtcggccgcggcgcgccctcgggccagcagcccgcg
cgcaagcgtccggcccgccgcccgtcgcgcgcgcccaaggccgcccagcgggactga
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