Paenibacillus yonginensis: AWM70_01390
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Entry
AWM70_01390 CDS
T04810
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
pyg
Paenibacillus yonginensis
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AWM70_01390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyg03400
]
AWM70_01390
Enzymes [BR:
pyg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AWM70_01390
DNA repair and recombination proteins [BR:
pyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AWM70_01390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ANS77033
UniProt:
A0A1B1N6H6
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All DBs
Position
322866..323813
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AA seq
315 aa
AA seq
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MEIKAVQPFEPLTTETLPAGERWAAQVKWDGVRMLTYHDGGTSSRLINRKGNERTLQYPE
FTDSRPYCRAQSFILDGEMMSIENNKPSFHAIMKRDSLRKADEIRFAADRIAVSYMIFDL
LYCNGEWVTNRPLEERQRLLEQIIVPGERVQLCQNYPDAEQLFEVMRQNHWEGVVCKDLD
STYAVGGKDKRWQKKKFFRDLYAAVGGVTYRDGIVNALLLGLYDEAGKFLYIGHAGAGKF
TVQDWRFLTAEAERLKIPNRPFHNVPARLKGAAWMLPSLTVKVEYLEWTSGWTLRHPVLQ
SLAGVSPEQCTVEQI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatcaaagcggttcagccctttgaacctttaactacggagacgctgccagccggc
gagcgctgggccgcccaggtcaagtgggacggcgttcgcatgctgacctatcatgacgga
gggaccagcagcagactgattaaccggaagggcaacgagcggacccttcaatatccggaa
tttacagacagcaggccatactgcagggcccagtcgtttattctggacggcgagatgatg
tccatcgaaaataacaaaccttctttccatgccattatgaaacgcgacagcctgcgcaag
gcggacgaaatccgttttgccgccgatcggatcgccgtgagttatatgatttttgatctt
ttatactgcaatggcgaatgggtgaccaaccgtccgctggaggaacgccagcggctgctg
gagcaaatcatcgttcccggtgagcgggtgcagctctgccagaactatccggatgcggag
cagctgttcgaggtgatgcgccaaaatcattgggaaggcgtggtttgcaaggatctggac
agtacttatgcggtaggcgggaaagataaacgctggcagaagaagaaatttttccgtgat
ttatatgcagctgttggaggggtcacttaccgcgacggcatcgtaaatgccctgctgctt
ggtctctacgacgaggcgggaaaattcctttatatcggacatgccggagcaggcaagttc
acggtgcaggattggcgtttcctgaccgcggaggcggaacgcttgaagatcccgaatcgc
ccgtttcacaatgtgccggcacggctaaaaggggcggcctggatgctgccgtccctcacg
gtgaaggttgaatatctggaatggaccagcggctggacgctccgccatcccgtgcttcag
agcctggcgggcgtcagcccggagcagtgtacggtggaacagatctaa
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