Phormidium yuhuli: NEA10_15460
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Entry
NEA10_15460 CDS
T08410
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh03030
DNA replication
pyh03430
Mismatch repair
pyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEA10_15460 (dnaN)
03430 Mismatch repair
NEA10_15460 (dnaN)
03440 Homologous recombination
NEA10_15460 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyh03032
]
NEA10_15460 (dnaN)
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_15460 (dnaN)
Enzymes [BR:
pyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEA10_15460 (dnaN)
DNA replication proteins [BR:
pyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEA10_15460 (dnaN)
DNA repair and recombination proteins [BR:
pyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEA10_15460 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
DUF4923
Motif
Other DBs
NCBI-ProteinID:
USR90230
LinkDB
All DBs
Position
3610781..3611929
Genome browser
AA seq
382 aa
AA seq
DB search
MKLVCTQGELNTHLSLAIHAVPSRPTHPVLANVRLTADAQQQQIQLTGFDLSLGIRTSFP
AQVEASGDVALPAKLLNDIVSRLPEGDLTLEHQEDSYQTTLTSVSGTYKVQGMSVEEFPE
LPAIEDGKVIQLGSESLLEGLRGTLFATSSDETKQVLTGVHLAVRADGIEFAATDGHRLA
VVEALNDGDSPAINVGDDEVFEVTVPAQALRELERTIGKRATPTPLTLSVDEGQAVFELA
DRRLTSRTLEGAYPAYRQLIPREFENQANLDRRALLSALERIAVIADRKNNIVKFSFDSS
GQQVTLGVDAADVGSGTECLPAQISGESLDIAFNVKYVMESLRNLQSTEIQLQLNTATSP
VILTPLGGTKMIHLVMPVQIRE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtttgcacccaaggggaactcaacacccacctctccctcgctatccatgct
gttccctcccgtccaacgcatccggttttagccaatgtccgcctcaccgctgatgctcaa
cagcaacagattcaactcaccggctttgacctcagcctcgggattcgcaccagtttcccg
gcccaagtcgaggccagtggtgacgttgccctacccgccaaactcctcaatgacattgtc
tcccgactccccgagggcgacctaacccttgaacaccaggaggacagttatcaaactacc
ctcacctccgtctcaggaacctataaagtccagggaatgagtgtggaggaatttcctgaa
ctacccgccattgaagacggcaaagtcatccaactcggcagcgagtcactgcttgaaggg
ttacggggaaccctgttcgccaccagttccgacgaaaccaaacaagtccttaccggcgtt
cacctggcggttcgggccgatggcattgaatttgcggctacggacggtcatcgtctggcg
gtggtggaagcccttaatgatggggatagccccgccatcaatgtcggcgatgatgaagtc
tttgaagtcaccgttcccgcccaggccctacgggaattagagcgaaccattggcaaacgg
gctacccccacccctttaaccctctccgttgatgaaggacaagcggtgtttgagttggcc
gaccgtcgcctcaccagtcgcaccctagagggagcctatcccgcctatcgccaactgatt
ccccgggagtttgagaatcaagccaatcttgaccgtcgcgccctcctcagcgccctagaa
cggattgctgtcattgctgaccgcaaaaataacatcgtcaagtttagttttgatagcagc
ggccaacaggtcaccttgggcgtggatgcggccgatgtaggcagtgggacggaatgtttg
cccgcccaaatttccggtgagagtctggacattgccttcaatgttaagtatgtgatggaa
tccctgcggaatctccaatccacagaaatccaacttcagttaaacaccgccacttccccc
gtgattcttacgcctctcgggggaaccaagatgattcacttggtgatgccagttcagatt
cgcgagtag
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