Pseudomonas yamanorum: AK972_4605
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Entry
AK972_4605 CDS
T05821
Name
(GenBank) RND efflux system, outer membrane lipoprotein CmeC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pym
Pseudomonas yamanorum
Pathway
pym01501
beta-Lactam resistance
pym02024
Quorum sensing
Module
pym_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_4605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AK972_4605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_4605
01504 Antimicrobial resistance genes [BR:
pym01504
]
AK972_4605
Transporters [BR:
pym02000
]
Other transporters
Pores ion channels [TC:
1
]
AK972_4605
Antimicrobial resistance genes [BR:
pym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AK972_4605
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AK972_4605
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AK972_4605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AMW85405
LinkDB
All DBs
Position
5082434..5083891
Genome browser
AA seq
485 aa
AA seq
DB search
MSKSLLSLAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPGQAAAEQGWKQFF
HDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAISATGSGSRSRTPAKLS
QTGESTISSQYSAGLGISSYELDLFGRVRSLSEQALQQYFATEEARRTTQISLVASVANA
YLTWQADKELLKLTQDTLGAFEQSYKLTSRSNEVGVASALDLSQARTSVENARVALARYT
RQVAQDENSLTLLLGTGLPANIASRPLADDLLSEVPAGLPSDLLQRRPDILQAEYNLKAA
NANIGAARAAFFPSISLTASAGTASPTLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLD
YSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYRLAERRYR
IGVDSNLTFLDAQRQLFSAQQSLITDRLAQLNSEVNLYKALGGGWNEQTAKNEPLKEEAP
PLKLF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctactttccttagccgtcacggcattcgtgctcagtggctgctcgctg
atcccggactaccagcgccctgaagcgccggtagccgcgcagttcccgcaggggccggcg
tattcgtcggcccaggcgcctggccaggccgctgccgagcaaggctggaagcagtttttc
catgaccctgccctgcaacagctgatccagactgcactggtgaacaaccgcgacctgcgt
gtcgcggccctgaacatcgacgcgtatgccgcgcagtaccagatccagcgtgccgacctg
ttcccggcaatctcggccacgggcagcggcagccgctcgcgtaccccggccaagctgtcg
cagaccggcgaatcgaccatctccagtcagtactcggctggcctcgggatcagctcttat
gagctggacctgttcggccgcgtccgtagcctgagcgaacaagcgctgcaacaatacttc
gccactgaagaagcgcgtcgcacgacccagatcagcctggtggccagcgtggccaatgcc
tacctgacctggcaggccgacaaggaactgctcaagctcacccaggacaccctcggtgcg
ttcgaacagagctacaagctcacctcgcgcagcaacgaagtcggcgtggcgtcggccctg
gacttgagccaggcccgcacctcggtggaaaacgcccgggttgcactggcgcgctatacc
cgccaggtggctcaggacgaaaacagcctgaccctgctgctgggcaccggcctgccggca
aacatcgccagccggccattggctgatgacctgttgagcgaagtaccggccggcctgcca
tcggaccttctgcaacgtcgtcccgacatcctgcaggccgagtacaacctcaaggcggct
aacgccaacatcggcgcagcacgggcggcgttcttcccgagcatcagcctgaccgccagt
gccggcaccgcaagcccgaccctgggcggcctgttcaagggcggttcgggtacctggtcg
tttgcaccgcagatcaacatcccgatcttcaacgccggcagcctgcgcgccagcctggat
tactcgaaaatccagaaagagatcaacgtcgccaactacgagaaagcgatccagaccggc
ttccaggaagtctccgatggcctcgccgcccgtgagacctacaagcagcaactggacgcc
caacgtggcttcgtcgcggccaaccaggactactaccgcctggccgagcgtcgctaccgc
attggtgtcgacagcaacctgacgttcctcgatgcccagcgccaactgttcagtgcccag
caatcgctgatcaccgatcgcctggcgcagctcaacagcgaggtcaacctgtacaaggcc
ctcggtggtggctggaacgaacagaccgcgaagaacgaaccgttgaaagaagaagcaccg
cccttgaagttgttctga
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