KEGG   Pyrobaculum ferrireducens: P186_2309
Entry
P186_2309         CDS       T01670                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pyr  Pyrobaculum ferrireducens
Pathway
pyr03030  DNA replication
pyr03410  Base excision repair
pyr03420  Nucleotide excision repair
pyr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P186_2309
   03410 Base excision repair
    P186_2309
   03420 Nucleotide excision repair
    P186_2309
   03430 Mismatch repair
    P186_2309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyr03032]
    P186_2309
   03400 DNA repair and recombination proteins [BR:pyr03400]
    P186_2309
Enzymes [BR:pyr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     P186_2309
    6.5.1.6  DNA ligase (ATP or NAD+)
     P186_2309
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     P186_2309
DNA replication proteins [BR:pyr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    P186_2309
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     P186_2309
DNA repair and recombination proteins [BR:pyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     P186_2309
   NER (nucleotide excision repair)
    Other NER factors
     P186_2309
   MMR (mismatch excision repair)
    Other MMR factors
     P186_2309
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AET33699
UniProt: G7VBT2
LinkDB
Position
1928088..1929779
AA seq 563 aa
MVKLLISLFKKARPEEIDKIVYFILGDLRPPWEGVELGVAEKLCIRALSKASGVPASELE
ALYKKTGDVGEAARRALSTSKRPGLLAFGSQKPLEVSEVYDVLLKVARASGEGAQDLKIN
LLSSLFARASPEEGKYIARFVVGRLRLGVADMTIIEGLSEAFGVEKESLERAYHVYPDLG
RLARHVAEGRPLEEIKITLGVPVLPMLAQRLSSASEILAKLGGSAVCEYKYDGERAQIHL
SKAGVKIFSRRLEDITHAYPDVVKAVREAVSAGEAILEGEIVAVDPDTGDMLPFQELMHR
KRKHEVAAAVEMYPTVLYLFDVLYVDGEDLTEEPLIYRRVKLSEIVKESDKVSIAKWRIF
DDPDSVDVFFHESVSMGTEGLICKSPTSVYEMGARGWNWIKYKRDYRSEMIDTVDLVVVG
AFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLKKMYETLQPLKLPHRHPR
VVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSP
EQATTVAEMLELYKRQKKVAQPE
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggtaaagctcctcatctcgttgtttaaaaaggcgaggcccgaggagatcgacaagatt
gtctacttcatcctgggggacttgcggccgccgtgggagggggtggagctcggcgtcgct
gagaagttgtgtatcagagccctgtctaaggcaagcggggtcccggcctctgaattagag
gcgctgtacaagaagacgggcgacgtgggggaggcggcgaggcgcgccctctctacctct
aagcggcctgggcttctcgccttcggctcccagaagccgcttgaggtttccgaggtgtac
gacgtgttgctcaaggtggccagagcgtcgggggagggggcgcaggacttgaagataaac
ctcctctcctctctcttcgcgcgggcgtcgccggaggaggggaagtacatcgcccgcttt
gtcgtggggaggctgaggctgggggttgccgacatgacgattatagaggggctctccgag
gccttcggcgtggagaaggagtctctggagagggcctatcacgtctatcccgacctgggc
cgcctcgctaggcacgtcgccgaggggaggccgctggaggagataaagattacgcttggc
gtgcccgtgttgcccatgctggctcagaggctgtcatcggcatccgagatcctcgccaag
ctcggggggtcggcggtgtgtgagtacaagtacgacggggagagggcccagatccacctc
tcaaaggccggggtgaagattttcagcaggaggcttgaggacataacccacgcctatcca
gacgtggtgaaggccgtaagggaggcggtgtcggcgggggaggcgatcctcgagggggag
atagtggccgtcgaccccgacaccggcgacatgttgcccttccaggagttgatgcatagg
aagaggaaacacgaagtagcggctgctgtggagatgtaccccaccgtcctctacctcttt
gacgtgctgtacgtagacggtgaggacttaaccgaggagcccctcatctaccgccgcgtc
aagctttccgagatcgtcaaggaaagcgacaaggtctccattgctaagtggaggattttc
gacgacccagactcggtggacgtcttcttccacgagtcggtctccatgggcacggagggg
ctgatctgcaagtcgccgacttctgtgtatgaaatgggcgcccgggggtggaactggatt
aagtacaagcgggactaccgtagcgagatgatagacaccgtcgacctcgtggtggtcggc
gcgttccacggccgcgggaagagggcgggcctctacggcgcctttctcctggcggcctac
gacccatccacggacatgttctacaccgtgtgtaaagtggggagcggcttcaccgacgcc
gacctcaagaagatgtacgaaacgttgcaacccctcaagctcccccacagacaccccagg
gtggtgtcaaagatggaggccgacgtctggttcgtcccccaggtggtgatagaggtcata
ggcgccgaaataaccctctcgccgcttcacacctgctgcctcggcgcggtgcggcccggc
gtggggctggcggtgaggttcccgaggttcaccggccgctacagaagcgacaagtcgcca
gagcaggccaccaccgtggcggagatgcttgagctatataagaggcagaagaaggtggct
cagcctgagtag

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